Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1817 ATGCCGGATTGCATATTCGCGCCGTACTTCCCTCCCGAAGAGCCCCAAAAGTTCGCCAACGTCCACAAGATATTCGGCGCCAGCAACGTCAGCAAGCTGCTCAATGAAGTGCAGCCGCATCAGCGCGAGGACGCCGTCAACTCGCTGGCTTACGAAGCCGAAGCCAGGATCAAGGATCCCGTCTACGGCTGCGTCGGCGCCATCTCTGTGCTGCAGCGCCAAGTCTTGCGCCTCCAGAAGGAACTCGACGCCACCAACGCTGACTTGATCCGCTTCACTACCGCTACGCCGCCCAATCATAGCGAAATCCCTAGGATTACTATACCCTCACAATCTACAACCACCATGGCTACTCCTGATCGCTCACAGCCACACCAGATCCAAGTCCACACACAGCACCGTTTCGAAACCACCGGTCTCGGCCCCCAATACGGCGCCGCCCGTTACGGCGAAGGCGGCCTCAAGAGCACTCTCTTCCCCGACAGGGGCCCCTCCACCTCTCAGATTCTCGCCGTCGTCACCGGCGTTCCCATCGGCGGCACTCTCCTCGCCCTCGCCGGCTTCGCGCTCGTCGGGACTCTCATCGGCGCCGCCCTCGCCCTCCCGCTGTTCGTGCTCTTCAGCCCGGTTCTGGTCCCGGCCACCATCGTGATCGGGCTGGCGGTGGCCGGGTTCTTGACGTCGGGGGCCTGCGCGCTGACGGCGCTGTCGTCGTTCTCGTGGGTGATGAATTACATACGGGAGACGCAGGGGACGGTGCCGGAGCAGCTGGACTCGGCGAAGCGGCGCGTGGCGGATATGGCGGGGTATTTGGGGCAGAAGACGAAGGACGTCGGGCAGAAGACGAAGGAGGTTGGGCAGGATATTCAGACCAAGGCGCAGGACGCGAAGAGGTCGTGA 900 0.6278 MPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVLRLQKELDATNADLIRFTTATPPNHSEIPRITIPSQSTTTMATPDRSQPHQIQVHTQHRFETTGLGPQYGAARYGEGGLKSTLFPDRGPSTSQILAVVTGVPIGGTLLALAGFALVGTLIGAALALPLFVLFSPVLVPATIVIGLAVAGFLTSGACALTALSSFSWVMNYIRETQGTVPEQLDSAKRRVADMAGYLGQKTKDVGQKTKEVGQDIQTKAQDAKRS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1817 299 ProSiteProfiles LOB domain profile. 1 89 IPR004883 -
Sto8g1817 299 Coils Coil 68 88 - -
Sto8g1817 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 112 - -
Sto8g1817 299 Pfam Lateral organ boundaries (LOB) domain 2 85 IPR004883 -
Sto8g1817 299 Pfam Oleosin 167 279 IPR000136 GO:0012511|GO:0016021
Sto8g1817 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 1 112 - -
Sto8g1817 299 MobiDBLite consensus disorder prediction 278 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1817 Sto-Chr8 11568982 11577568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1817 121 290 Lipid Metabolism Gene Families AT3G01570 52.941 3.03e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto8g1817 Oleosin 2.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1817 - - adu:107495055 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1817 8 11568982 11577568 Sto8g1817 8 11568982 11577568 ECH