Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1800 ATGGAATCAGCTGTCAATGGAGATGAGTCTGTATCAGAGGTTCAGAATTCAGTTTCTGCCATACATCACCATTACCCTCCTTCAACATCTGAAACTCCTCGGCCGAATTCCCGGCCTCCCTTAAGAGCATCATCGAAAAATCATGTAGCTTCTTCTACTTCCTATCTCACTGGTCATCCCAATTGTGGATTGAAGATTCACCAGAAGAATCCTTATCAGGATGTGCAGCATCAAGAACTACCACCAAATATGTCAAAGCAGTATCACAATTCTAGTGAAACAAAGGATTGTGATTCCAATGGCATGTTAGCCTCATCTAAAGGAGTAGTAGTAGTTGATCATACAAAGAGTTACTCTCAGTCAGAAATTACTTTCTGTACAAGTCCTCAGAATAGCTTCTATTCTACCACAGCCTATTCAGAAGCCAAACAAAGTTTTGCCAATACAGAAGTCAGTGAATGTGTTAGTGTCGTTGACAAGTCAGGCGAAAGTTGTGATGTCACTAACTCTTGTGACTTTAACGAGAGCAGGAAGACCAGCATCTGTAGAGGGAGTACTGGAAGTGATGTGAGTGATGAGAGCAGCACCAGTAGTTTGAGCAGTGCTTTGTATAAACCCCACAAGGCTAATGATATAAGATGGGAAGCAATCCAAGCCGTCCGAGCCCGTGATGGGATGCTGGAAATGAGGCATTTCAGGTTGCTCAAGAGGTTGGGATGTGGAGACATAGGGAGTGTTCATCTTGCAGAATTGAGTGGCACGAGAACCTGTTTTGCAATGAAGATTATGAACAAAACCGAGCTGGCTAGTCGGAAGAAGCTTCTGAGGGCTCAAACAGAAAGGGAGATTTTGCAGTCTCTGGATCACCCTTTTCTTCCCACTTTGTATACACATTTTGAGACAGAGACATTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGAGACCTGCATGCATTGAGGCAGAGACAACCTAGGAAGTATTTCTCCGAGCATGCTGCCAGGTTTTACGTAGCAGAAGTTCTTCTTGCTTTGGAGTACCTGCACATGCTAGGAATCATCTACAGAGACCTGAAACCCGAGAACGTGCTGGTGAGAGAAGACGGCCACATAATGCTCTCGGACTTCGACCTCTCTCTCCGATGCGCCGTGAGTCCAACGCTCGTCAAATCCTCAAACACCACCATGGACACACGAAGCTCCGGCTACTGCGTCCAACCCGCCTGCATCGAGCCAACCTGCGTAATGCAGCCAGACTGCATGATCCAACCCTCCTGCTTCACCCCCCGCTTCCTCTCCAGCAAACACAAGAAAGACAAAAAGGCCAAACCAAAGACCGAAACGCACCACCAAGTCACTCCTCTTCCCGAGCTCATCGCCGAGCCCACCAACGCCCGATCCATGTCCTTCGTGGGCACGCACGAGTACTTGGCCCCCGAAATCATCAAAGGCGAAGGCCACGGCAGCGCCGTCGACTGGTGGACCTTCGGAATATTCCTCTACGAGCTGCTCTTCGGAAGAACGCCGTTCAAGGGATCGGCCAACAGAGCGACGCTGTTCAACGTGGTGGGGCAGCCGCTGAGGTTCCCGGAATCGCCGACGGTGAGCTTCGCGGCTAGGGATTTGATCAGAGGATTGCTCGTGAAAGAGCCTCAGCATCGGCTGGCTTACAGACGCGGAGCCACGGAGATCAAACAGCATCCGTTCTTTCAGAACGTGAATTGGGCTCTGATCCGATGTGCGAACCCGCCGGAGATACCGAGGGTGGGACCCATCCGATCGGAGGCGGCGCACGACAACAGCAAAGTGCCTGGCGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1857 0.497 MESAVNGDESVSEVQNSVSAIHHHYPPSTSETPRPNSRPPLRASSKNHVASSTSYLTGHPNCGLKIHQKNPYQDVQHQELPPNMSKQYHNSSETKDCDSNGMLASSKGVVVVDHTKSYSQSEITFCTSPQNSFYSTTAYSEAKQSFANTEVSECVSVVDKSGESCDVTNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAVRARDGMLEMRHFRLLKRLGCGDIGSVHLAELSGTRTCFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNTTMDTRSSGYCVQPACIEPTCVMQPDCMIQPSCFTPRFLSSKHKKDKKAKPKTETHHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEIPRVGPIRSEAAHDNSKVPGVKPSGNYLDIDFF 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1800 618 CDD STKc_phototropin_like 230 593 - -
Sto8g1800 618 SMART serkin_6 232 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1800 618 ProSiteProfiles Protein kinase domain profile. 232 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1800 618 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 84 618 - -
Sto8g1800 618 PANTHER FLIPPASE KINASE 1-RELATED 84 618 - -
Sto8g1800 618 Pfam Protein kinase domain 467 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1800 618 Pfam Protein kinase domain 233 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1800 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Sto8g1800 618 SUPERFAMILY Protein kinase-like (PK-like) 210 587 IPR011009 -
Sto8g1800 618 Gene3D Phosphorylase Kinase; domain 1 224 317 - -
Sto8g1800 618 Gene3D Transferase(Phosphotransferase) domain 1 318 587 - -
Sto8g1800 618 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1800 Sto-Chr8 11452561 11455043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1800 136 618 AGC Kinase Gene Family AT5G47750 71.831 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto8g1800 Pkinase 8.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1800 K08286 - gmx:100810909 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1800 8 11452561 11455043 Sto8g1800 8 11452561 11455043 ECH