Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1797 ATGGAGGAAGAGGTTGTGCAAAACCTATGGAAGGGTGAGAGAGAAGCTCAGATTGAAGCAGCCATGGAGCTGAGTAGATTAAGCAGCAAGCAGAGACACAAGCTTGCAGAAACTGGAATAATGGTGCCTCTCATTTCTATGCTTCATTCTCAAGACTTCCAAGCCATTGAAGCTTCTCTCTGTGCTCTCCTCTGTCTTGCCTTCGGTAGTGAAAGAAACAAGATTCGGATCGTCAAATCGGGAGCTTTACCGGTATTGCTGAATCTCCTCCAATGCCAGAGCCAACCACTGGTAGAATTAACCATAGCAGCCATGCTAACCCTCTCATCCTGCAAGGCAAACAAGGTAGCCATAGCTTCAAGTGGAGCAATCCAACTATTAGTACAATTCCTTTCTGAGAATTGCTATACCATTCAGTCTCAGCTAGATGCTATATCCACCCTCCACAACCTCTCAACCTGCAAGGAGACCATACCTCTAATAGTCTCTTCCGGGATCACAATTTCATTGCTTGAACTGATCCAATACAGCTCAGGTGGATCAAAGTCATCAGAAATAGTGGAGAAAGCAATCGGGTTGCTGGAGAATGTGGTGTATTCATCAGAGGCAGCATTGAGTGAGGCTGCTGGTATAGGAGGGGGAATAAGGATAGTGGTTGAGACAATTGAGTACAGGGGAATGATATTGAGAGAGGGGGTTATGCCTGGGTTGCTTCAGGTCAGTGTGGAGGGAACACACAGGGCAAAAGCTATGGCTCGAGAGTTATTGTTGCTCCTGAGGGATTGCTCCGATTATGATGGCTCCACGAGTAAggatcATGGGGTTTTGGAGCAGATTATGCAGGAGATTGATGCAGAAGGGGAGGAATTGTCTGGGAGTACTTTGAGATTGGTGGAGGAGATGATTGCCAAGCTTAGTACATGA 924 0.4621 MEEEVVQNLWKGEREAQIEAAMELSRLSSKQRHKLAETGIMVPLISMLHSQDFQAIEASLCALLCLAFGSERNKIRIVKSGALPVLLNLLQCQSQPLVELTIAAMLTLSSCKANKVAIASSGAIQLLVQFLSENCYTIQSQLDAISTLHNLSTCKETIPLIVSSGITISLLELIQYSSGGSKSSEIVEKAIGLLENVVYSSEAALSEAAGIGGGIRIVVETIEYRGMILREGVMPGLLQVSVEGTHRAKAMARELLLLLRDCSDYDGSTSKDHGVLEQIMQEIDAEGEELSGSTLRLVEEMIAKLST 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1797 307 PANTHER U BOX DOMAIN-CONTAINING 223 287 - -
Sto8g1797 307 PANTHER U BOX DOMAIN-CONTAINING 1 223 - -
Sto8g1797 307 Pfam Armadillo/beta-catenin-like repeat 71 99 IPR000225 GO:0005515
Sto8g1797 307 SMART arm_5 28 68 IPR000225 GO:0005515
Sto8g1797 307 SMART arm_5 154 199 IPR000225 GO:0005515
Sto8g1797 307 SMART arm_5 111 153 IPR000225 GO:0005515
Sto8g1797 307 SMART arm_5 70 110 IPR000225 GO:0005515
Sto8g1797 307 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Sto8g1797 307 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 223 - -
Sto8g1797 307 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 223 287 - -
Sto8g1797 307 Gene3D - 3 305 IPR011989 -
Sto8g1797 307 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 166 IPR000225 GO:0005515
Sto8g1797 307 SUPERFAMILY ARM repeat 4 283 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1797 Sto-Chr8 11442817 11444286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1797 3 261 U-box Gene Family AT2G23140 31.119 2.99e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1797 - - gmx:100778534 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1797 8 11442817 11444286 Sto8g1797 8 11442817 11444286 ECH