Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1793 ATGTACGGGATGAGGATTGATGACCAGCTCATCGGAAGGTTGCAACTTGACGGAAGCCCAGAAATTGGCGAGACTGAAGGAGATGGTGCTGCCGTAGTAGACATCGCTAGGGTTTCCCAGCAAACCCACCCTCGCATACGCCTTGTGAGCTGGCTTATTGACATAGGAGGATTTGCAAAGAAAGTAAAAAGCACTACTCTGTCTTCAACAGATCAAATCAAAGATTGTGGGGCATATCGTGAATGTCCAAATTGTCACTATCGTATTGATAACTCTGATGTTTCTCCCGAGTGGCCTGGCTTTCCTGTTGGTGTGAAGTTTGATCCTTCTGATGCACAGCTTCTAGAACATTTAGCTGCCAAATGTGGCATGGAGAACACAGAGCCGCACATGTTTATCCATGAGTTCATCCCGACAATAGATGGAGACCAAGGTAtctgctacacacatccagaaaatctTCCTGGTGCTAAGAAAGATGGGAACAGTGTTCATTTCTTTCACAGAATAAGTAATGCATATGCTACTGGTCATCGAAAACGCCGAAAGATTCATCATGAACATGGTTTGTCCGAGGAGCATGTGCGTTGGCACAAGACTGGTAAGACCAAGCCTGTGATGGAAGATGGAGTATGCAAAGGCTATAAAAAGATCATGGTTCTTTATGTAAGAACTAAGGATTCCAAGCCTTATAAATCCAACTGGGTGATGCATCAATACCATCTGGGAACTGATGAGAAGGATGGTGAATATGTggtttcaaaaattttttatcaacaGCAGAAACTGATTGACAAAAACGAGGAGAATACAGTGGTTGAAGATTCTGGTGATATGATTTCACGAACAAGTCCGAAAACTCCAAAGCCAAATCCTCCCAATCCTCCTCGTCCGGGAAAATCTGTTGGCTGTGATGATAACATTGATGAAACTGTGCTCCTTTCACCCAATCAGGAAATCAAGCCTTTCCCTCAAGAATCACATGCCCCACCATCTGATGGTAATCTGGAGGAAGACAACACAGGTGGCACCGGATGGTTGGCTGGTGAATCACAAGCTGTTGAAAATGACTTTGATGGCTTGGATGACATATTGTTGTGCAATGAAATCTTAGATTCTTCTTCTGTCTTCAATGATTCCGGATTCAACTCATCCTCTACTAATGGCTTTGCTTGCAACACGAATGGATTGGCTGGAAGTGGACATGATAACTTATCCTATGGAATCTCTGATTTGGATAACCTGGAATTGGATACTCCTCCAGATTTCCAACTTTCTAATCTGCAATATTGTTCTCAAGACAGTATCCTTGAGTGGATAGACAGGTTATGA 1332 0.4197 MYGMRIDDQLIGRLQLDGSPEIGETEGDGAAVVDIARVSQQTHPRIRLVSWLIDIGGFAKKVKSTTLSSTDQIKDCGAYRECPNCHYRIDNSDVSPEWPGFPVGVKFDPSDAQLLEHLAAKCGMENTEPHMFIHEFIPTIDGDQGICYTHPENLPGAKKDGNSVHFFHRISNAYATGHRKRRKIHHEHGLSEEHVRWHKTGKTKPVMEDGVCKGYKKIMVLYVRTKDSKPYKSNWVMHQYHLGTDEKDGEYVVSKIFYQQQKLIDKNEENTVVEDSGDMISRTSPKTPKPNPPNPPRPGKSVGCDDNIDETVLLSPNQEIKPFPQESHAPPSDGNLEEDNTGGTGWLAGESQAVENDFDGLDDILLCNEILDSSSVFNDSGFNSSSTNGFACNTNGLAGSGHDNLSYGISDLDNLELDTPPDFQLSNLQYCSQDSILEWIDRL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1793 443 ProSiteProfiles NAC domain profile. 101 259 IPR003441 GO:0003677|GO:0006355
Sto8g1793 443 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 50 441 - -
Sto8g1793 443 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 50 441 IPR044799 GO:0003700
Sto8g1793 443 MobiDBLite consensus disorder prediction 268 348 - -
Sto8g1793 443 Gene3D NAC domain 110 264 IPR036093 GO:0003677|GO:0006355
Sto8g1793 443 SUPERFAMILY NAC domain 86 259 IPR036093 GO:0003677|GO:0006355
Sto8g1793 443 Pfam No apical meristem (NAM) protein 102 242 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1793 Sto-Chr8 11397327 11402104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1793 79 261 NAC Transcription Factor Family AT4G28500 55.319 1.04e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g1793 NAM 1.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1793 - - gmx:100794879 553.132