LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g1767	ATGCGGCCTTATCTTTCCCTCTCTTTCCTCCTTATCGTTCTCTCTCTTTACACACTACTTGCTTCTTCCTCACCCCTTCATCAAGACCCCAATCTTGTTGTACAAGACGTgcacaggtatatatatatatatatatatatatatatatatatattaatGCGCATCAATGCGTCGAGGAGAAACCTGGGGTCCGTATCATGCGGAACCGGGAACCCCATCGACGACTGCTGGCGATGCGACCCCAACTGGGAGTCGAACCGGCAGAGGCTAGCGGACTGCGCTATCGGCTTCGGCAAGGACGCCATGGGGGGACGAAACGGGCGCATCTACGTGGTTTCGGATTCGGGCGACGACGACCCCATCAACCCGAAACCCGGCACTCTCCGTCACGCGGTCATACAAGAGGAGCCGCTCTGGATCATCTTCAGCCGAGACATGGTGCTGAACCTGAAGCAAGAGCTAATAATGAACTCCTACAAAACCATCGACGGGCGAGGCGCCAACGTGCACATCGCGGGGGGAGGATGCCTGACCCTCCACTTCATCTCCAACGTCATCATCCACGGCATCAACATCCACGACTGCAAGCCCACGGGGAACGCGGAGATCCGCGACTCACCCAATCACTCGGGGTTCTGGACGGTGTCGGACGGCGACGGCATCTCCATCTTCAACTCGAAACACGTGTGGGTGGACCACTGCTCCCTCTCGAACTGCCAGGACGGGCTCATCGACGCCATCCACGGATCCACCGCCATCACCATCTCCAACAACTACATGACGCATCACGACAAGGTGATGCTGCTGGGGCATAACGACGAGTACGAGGCGGATAAGGACATGCAGGTGACGGTGTCGTTTAACCACTTCGGGGAAGGGCTGGTGCAGAGGATGCCCAGGTGTAGACACGGGTTTTTCCACGTGGTGAACAATGAGTACACGCATTGGGAGATGTACGCTATAGGGGGGAGTGGGGAGCCTACGATTCTTAGCCAGGGGAATAGGTTCCTTGCGCCGGATGAGAAGGCCAGCAAGGAGGTCACCAAGCACGAGGATGCGGCGGAGAGTGAGTGGATGAGGTGGAATTGGAAGTCGGAGGGGGATATGTTCTTGAATGGAGCCTTCTTCACGCAGTCCGGGGCCACTTCTGCTTCTACCTACGCTAAAGCCTACAGCCTTAGCGCTAGACCCTCCTCTCTCGTTCCTTCTATTACCCTTACTGCTGCCTCGAGGGCCTCGCTGGCAGGGGCAGGAGGGGAGGAGATGTCTTCTCCCTGGGAGAGGGGAGAGCTGGCAGGGGAGCCGCTGGGAGAAGCAGAGGCTTCAGGGGATGATGCTGATGACTCGGGGCTCTTGGCGGAAGGTGCGGGAGCCTCGACGGACTCCGAGCTCTTCGGGGAAGATGCGGGGGATGAGGATTCCGATGAGGATGACTTGGGGGATGAAGCCGGAGAGGCACCGGGGGAGGAGGCAGGGGATGCTGATGGAGAGTCTGCACCCATTGCTCCGGCCACCGCCACGAAGAGCACAGCAAGAACGATGATGAATTGA	1551	0.568	MRPYLSLSFLLIVLSLYTLLASSSPLHQDPNLVVQDVHRYIYIYIYIYIYILMRINASRRNLGSVSCGTGNPIDDCWRCDPNWESNRQRLADCAIGFGKDAMGGRNGRIYVVSDSGDDDPINPKPGTLRHAVIQEEPLWIIFSRDMVLNLKQELIMNSYKTIDGRGANVHIAGGGCLTLHFISNVIIHGINIHDCKPTGNAEIRDSPNHSGFWTVSDGDGISIFNSKHVWVDHCSLSNCQDGLIDAIHGSTAITISNNYMTHHDKVMLLGHNDEYEADKDMQVTVSFNHFGEGLVQRMPRCRHGFFHVVNNEYTHWEMYAIGGSGEPTILSQGNRFLAPDEKASKEVTKHEDAAESEWMRWNWKSEGDMFLNGAFFTQSGATSASTYAKAYSLSARPSSLVPSITLTAASRASLAGAGGEEMSSPWERGELAGEPLGEAEASGDDADDSGLLAEGAGASTDSELFGEDAGDEDSDEDDLGDEAGEAPGEEAGDADGESAPIAPATATKSTARTMMN	516

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Sto8g1767	516	MobiDBLite	consensus disorder prediction	436	516	-	-
Sto8g1767	516	PANTHER	OS04G0137100 PROTEIN	53	409	-	-
Sto8g1767	516	Gene3D	-	70	411	IPR012334	-
Sto8g1767	516	Pfam	Pectate lyase	152	336	IPR002022	-
Sto8g1767	516	PRINTS	Pollen allergen Amb family signature	93	110	IPR018082	-
Sto8g1767	516	PRINTS	Pollen allergen Amb family signature	117	142	IPR018082	-
Sto8g1767	516	PRINTS	Pollen allergen Amb family signature	153	169	IPR018082	-
Sto8g1767	516	PRINTS	Pollen allergen Amb family signature	217	238	IPR018082	-
Sto8g1767	516	PRINTS	Pollen allergen Amb family signature	297	316	IPR018082	-
Sto8g1767	516	PRINTS	Pollen allergen Amb family signature	319	338	IPR018082	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g1767	Sto-Chr8	11257545	11262160	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g1767	4	417	Polysaccharide Lyase	AT5G63180	67.308	0.0	583

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g1767	K01728		-	zju:107415231	644.425

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g1767	8	11257545	11262160	Sto8g1767	8	11257545	11262160	ECH
	Sto8g1767	8	11257545	11262160	Sto13g0354	13	3118149	3121319	ECH

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