Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1766 CTGACTCCCAGTAGTAGCACCACTCCTCATCCTCGGCGGAAAAACCGAAGCAAAACCCGTAAGCCCAAATACCTGAGCCTCCGCCTCCAGCTTAATCCCACCCAACACGAACAAGCTTCAGACGACATGAGTAGCAAGACGACGTCGCATCATcaacagcagcagcagcagctgaACCTCTTCCCTTTACATCCCGAGAATCTAGTGGATGACAAATTGGAGATGATGATGCAAGACGACCAAACAAACGTGGCCTTCCTCTTCACCTCCTCCCACGGCGCCCCTGCCTCCCTCACCGCCCTCCTCCGCCACGACTCCACCGCCACgacggaggaggaggaggaggaggatcgGAGGGTGGATGAGGAGAGCGGGAGGTCGATGCTGGTGCGGAAGGCAATGAAGAGAGGGAgcaaggaggaggaagaagaagagagggaggAGAGATGGGTGTGTTACTCTGAAGTCACCAGTTACAGCAGCGGCAATACGACGGACAGCACGGCCACCAccacgacgtcgtttgggtgtggGTTATTGTCGTTGAAGCTGGATTACGAAGGGGTATTGAATGCTTGGTCTGATCAACGCTCACTCTATGTCCCAAGGCCAGGGGAGACCCCACTCCCTCTTTCTCACCATCTCCTAATTCCCAATAAGAGGGAAAGCAGACTCTTCTCAAAGCGCATTCGCTATGAGGTTCGTAAGCTCAATGCAGAGAAACGCCCCAGAATGAAGGGACGATTTGTGAAGAGAGACTGA 762 0.4659 LTPSSSTTPHPRRKNRSKTRKPKYLSLRLQLNPTQHEQASDDMSSKTTSHHQQQQQQLNLFPLHPENLVDDKLEMMMQDDQTNVAFLFTSSHGAPASLTALLRHDSTATTEEEEEEDRRVDEESGRSMLVRKAMKRGSKEEEEEEREERWVCYSEVTSYSSGNTTDSTATTTTSFGCGLLSLKLDYEGVLNAWSDQRSLYVPRPGETPLPLSHHLLIPNKRESRLFSKRIRYEVRKLNAEKRPRMKGRFVKRD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1766 253 ProSiteProfiles CCT domain profile. 210 252 IPR010402 GO:0005515
Sto8g1766 253 MobiDBLite consensus disorder prediction 28 59 - -
Sto8g1766 253 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 206 - -
Sto8g1766 253 PANTHER CCT MOTIF FAMILY PROTEIN 8 206 - -
Sto8g1766 253 PANTHER CCT MOTIF FAMILY PROTEIN 219 253 - -
Sto8g1766 253 MobiDBLite consensus disorder prediction 1 59 - -
Sto8g1766 253 Pfam CCT motif 219 252 IPR010402 GO:0005515
Sto8g1766 253 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 219 253 - -
Sto8g1766 253 MobiDBLite consensus disorder prediction 120 144 - -
Sto8g1766 253 MobiDBLite consensus disorder prediction 104 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1766 Sto-Chr8 11252418 11253996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1766 183 252 C2C2-CO-like Transcription Factor Family AT1G49130 42.222 1.81e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto8g1766 CCT 4.1e-14 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1766 8 11252418 11253996 Sto8g1766 8 11252418 11253996 ECH