Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1757 ATGGAGGGTATGGAACCTGATATGAAAAGTCATCCACCGGAAGATGACCAGCAAAATGAAGGTCAAATATCATCTTCTGAAGCAGTGATTAATGCTGGCAAAGAGAGTCAAAACCCTAATTCTTCCTCTACAGCAGATAGTGATATGGTCATTGATACCAAGCATGAGTGTACAAGCCCAAATATTTGTCATATTGACCAAAGTCAGATGGAAATTAATGATGATTCCCAGAATTCAAACACTTGCTCTGATAACAAATTTCAGATTGATGCTGCTAACGGAAACCTGTCTCAGAGATCTGACATTTCCTATGTTGATGTTTCAAGTAACAGTTTTACCATAAAAGATGAGGAAGAGCTGTATGTGGTACCAAAAATTGGCATTGAGTTCAATTCAGAAGACCATGCTTATAAGTGTTATAGTAGGTATGCTGTTTTGCAAGGTTTCAGCATAAGAAAAGATTTTGTCAACAAAAGTAGAGTGAATGGTGCTGTGGTATCTAGAAGATACACTTGCCATAGACAGGGTTATCGACCTAACAAACATAATGCAAACCTGAGGAAATCCCAACAGGAAACAAGGACTGGATGTCTGGCCCATATGACTATAGCTCGTCAGCCCAACGGCAAGTTTCAAGTTACTCATTTTGAAACAGAGCACAATCATGAGTTTGTAACACCTTGTACAGCTCATACACTACCATCACAGAGAAGATTGAGTTTTGCTCAAGCAGTTGAATCTAATGTAGCTAATGATTCTGGGTTGGATGGGGTACCAAGACTTGGAATGGGATTTGACTCAGAAGATCATGCATATGAATTTTATAATACATATGCCGGACGTGTAGGTTTCAGTGTTCGGAAGGATTATGTAAACAGGAGCAAAATTGATGGGGCTGTAGCATCTAGAAGGTTTACATGCTTTAGAGAAGGTTTTCGGCAGAAAGACAAACGTGATGTGAATGTAAAGAGACCTCGGAAGGAAACTAGAATTGGATGTTTAGCACAACTGGTAATTTCTCGCCAACCTGATGGTAGATATCGTGTAACTCATTTTGAAGAAAAGCATAATCATGAGCTTGTTGCTGCCTGTAGAGTTCACATGTTACGATCACAGAAGAGGATAGCCACAACTCAAGCCATTGAAAGCACTGTGGTGGATGGTTCTAATGTGCTTCCTAAGTTGGCCTCTGAATCAAATTACAAGGCTATTGGAGGTTTTGATGATCAGGGTTATGATCCTATagattatgaaaataaattgtCTTTCACGCGTGTGAGAGAAATGAAAGAGGGagagattgaaaagatgaagcaACATTTTAAAAGCAAGCGATCCAAAAATCCTTCTTTCTTTTATGCTTTCCAGGTTGATTCTGATGATCAAATAACTAATATCTTTTGGGCTGATGAAAAGATGGTAGTAGACTATGGTGATTTTGGTGATGTTGTTTGCTTTGATTGTAGTTACAGATTTTATATAGACTGCCGGCCCTTCACTACATTTCTTGGTATAAATAATCACAAGCAAATGGTTATCTTTGGGGCTGCTCTTCTATATGATGAAACCATTGAATCTTTCAAGTGGCTTTTTCAAGTGTTCTTGGAAGCAATGTCTGGAAGAAAGCCAAAAACAATTCTTACAGATCAAGATGATATAATAGCTGGAGCAATCTCTTCTGAATTGCACGAAACAAACCACAAAATTTGTGTATGGCATGTGTACCAAAATGCACTAATGCAACTCAATCACATGTTTGTTGGATCTGGTTCTTTTGCTAATGATTTAAGCAGCTGCTTTTTTGATcatgaggaggaggaagattTTGTTGATGCGTGGAATGCTTTCCTGGGCAAGTATGATCTTTGGGAAAATGAATGGTTGTGTCAAATATATGAAAGCAGAGACAAATGGGCCATAGCATATGGAAGGCGAATTTTCTGTGCTGACATAACAAGTGTGCTGCGGAGAGAAAATCTTACTGGCAGCCTGAAAAAATACCTGAAGAATGATTCAGATGTGCTATCGTTTCTCAAGCATCTTGGGAAAGTGGTGACTGATTGGCACTACAAGGAATTGGAAGCCAATTATGATATGAGCCAGCATATGCCAGCACTGATGGGGGATGTGATTCTTTTAAAGCATGCAAGGGATCCATACACACCAAAGATATTTGAGCTATTTCAGAAAGAATATGAAACTTGTTTAAATCATGTGATAAAACATTGCAATGAGAGTGGATCATTGTACAGATATAAAGTTAGCTTATATGAACACTTACGAGAGTATACAGTTACCTTTAATTCATTGAATGAGACTGTCACTTGCAGCTGTATGAAATTTGAGTCTATGGGAGTATTATGCAGTCATGCTTTGAAAGTTCTTGATTACAGGAACATAAGGATACTTCCATCACTAGACAGGATGAGTGGAGCTTTCACCGTTCTTTCCAAAGAAATTCTTTGTGCCATTGCTTTTCACCCAAAGTCTCTGACTCTGAGGAGTTACGGAGGTGTAGAGTTTAGCTTGGTAGATACACTTACATCAGCGTTCAACATCTTTGAGGAAGACATTGGCGGTTTCTTCTTGCTATCAGAGTTACAGCATTATTTGCTTGTTCAAGCAAAGCAGCAGCCTTTTGAGCAGCAAGTTTCTTGTAATGAGCTTCAAAGAAAGCTTTCTTCTGAGCGACTGAACCGGGTCGAGAATACCTCTCAGCCTCTTCAACGTAACGGTTGTGAGAGAAAGAAGACCATTTCTCCCATGACAGAGACTCTGACATGA 2784 0.3836 MEGMEPDMKSHPPEDDQQNEGQISSSEAVINAGKESQNPNSSSTADSDMVIDTKHECTSPNICHIDQSQMEINDDSQNSNTCSDNKFQIDAANGNLSQRSDISYVDVSSNSFTIKDEEELYVVPKIGIEFNSEDHAYKCYSRYAVLQGFSIRKDFVNKSRVNGAVVSRRYTCHRQGYRPNKHNANLRKSQQETRTGCLAHMTIARQPNGKFQVTHFETEHNHEFVTPCTAHTLPSQRRLSFAQAVESNVANDSGLDGVPRLGMGFDSEDHAYEFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDVNVKRPRKETRIGCLAQLVISRQPDGRYRVTHFEEKHNHELVAACRVHMLRSQKRIATTQAIESTVVDGSNVLPKLASESNYKAIGGFDDQGYDPIDYENKLSFTRVREMKEGEIEKMKQHFKSKRSKNPSFFYAFQVDSDDQITNIFWADEKMVVDYGDFGDVVCFDCSYRFYIDCRPFTTFLGINNHKQMVIFGAALLYDETIESFKWLFQVFLEAMSGRKPKTILTDQDDIIAGAISSELHETNHKICVWHVYQNALMQLNHMFVGSGSFANDLSSCFFDHEEEEDFVDAWNAFLGKYDLWENEWLCQIYESRDKWAIAYGRRIFCADITSVLRRENLTGSLKKYLKNDSDVLSFLKHLGKVVTDWHYKELEANYDMSQHMPALMGDVILLKHARDPYTPKIFELFQKEYETCLNHVIKHCNESGSLYRYKVSLYEHLREYTVTFNSLNETVTCSCMKFESMGVLCSHALKVLDYRNIRILPSLDRMSGAFTVLSKEILCAIAFHPKSLTLRSYGGVEFSLVDTLTSAFNIFEEDIGGFFLLSELQHYLLVQAKQQPFEQQVSCNELQRKLSSERLNRVENTSQPLQRNGCERKKTISPMTETLT 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1757 927 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 248 805 IPR031052 GO:0006355
Sto8g1757 927 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 240 IPR031052 GO:0006355
Sto8g1757 927 Pfam SWIM zinc finger 763 798 IPR007527 GO:0008270
Sto8g1757 927 SMART 26again6 774 801 IPR006564 GO:0008270
Sto8g1757 927 MobiDBLite consensus disorder prediction 17 47 - -
Sto8g1757 927 MobiDBLite consensus disorder prediction 1 47 - -
Sto8g1757 927 Pfam FAR1 DNA-binding domain 140 225 IPR004330 -
Sto8g1757 927 Pfam FAR1 DNA-binding domain 273 361 IPR004330 -
Sto8g1757 927 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 248 805 - -
Sto8g1757 927 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 83 240 - -
Sto8g1757 927 ProSiteProfiles Zinc finger SWIM-type profile. 763 799 IPR007527 GO:0008270
Sto8g1757 927 MobiDBLite consensus disorder prediction 1 16 - -
Sto8g1757 927 Pfam MULE transposase domain 483 577 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1757 Sto-Chr8 11203664 11208913 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto8g1757 MULE 3.5e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1757 K17604 - gmx:102659753 1183.7