Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1756 ATGGGAAGGCAGCCCTGTTGTGATAAGGTTGGTTTGAAGAGAGGTCCATGGACAATTGAGGAAGATCATAAGCTCGTCAACTTCATCCTCAACAATGGCATTCATTGTTGGCGAATGGTTCCCAAGCTTGCTGGTCTTCTAAGATGTGGAAAGAGCTGCAGATTGAGATGGATTAATTATTTGAGACCAGACCTCAAGAGAGGTGGCTTCACAGAAATGGAAGAGGATCAAATTATTCAACTACATTCACGTCTTGGTAACAGGACAGACAATGAGATCAAGAACCATTGGAACACAAGAATCAAGAAGAGGTTGAAGCTGATGGGTGTGGACCCTTTGACTCACATGCCAATTAATCAACCAAAGGAACTTACTGATGTTGATAAAATAGAGATCAGAGACCAATTCCACCCAATTAGTTTTCCCAAAGGGTCCGAATCTGAACAAAATGTGGAGATGAAGTCCTTGGACAGTAATGATGGCTGCACAGAAACACAAGGAAGAAAAAGGGAAGAAGAGAACAAGGTGACTTGGGATGATACCTCTACTCTTTcaaacaaaaatgaaatcatATGCTCAAACTCAAACTCAAATTTGGAGTTTGAATCATGGATGAGCCAAGAAACCAACACCAGTTCTAGCTCATTCAGCAATTCTTTCTCTCACATGGATGATTCTAGCCATGTTTCTATGGGTGAATCCCCTTATCTGCAGGAAAACTCATTACTGCAATGGGTTGATAGTATCAATATGGATTCCATCCTCGCATGGGATAGCTTCAATCCCTTCGAACAGGACCTTTTCTTCTTGGAAAATAGACAATAA 825 0.4061 MGRQPCCDKVGLKRGPWTIEEDHKLVNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHSRLGNRTDNEIKNHWNTRIKKRLKLMGVDPLTHMPINQPKELTDVDKIEIRDQFHPISFPKGSESEQNVEMKSLDSNDGCTETQGRKREEENKVTWDDTSTLSNKNEIICSNSNSNLEFESWMSQETNTSSSSFSNSFSHMDDSSHVSMGESPYLQENSLLQWVDSINMDSILAWDSFNPFEQDLFFLENRQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1756 274 CDD SANT 70 99 IPR001005 -
Sto8g1756 274 Gene3D - 66 106 - -
Sto8g1756 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sto8g1756 274 CDD SANT 16 61 IPR001005 -
Sto8g1756 274 PANTHER MYB DOMAIN PROTEIN 40 2 248 - -
Sto8g1756 274 MobiDBLite consensus disorder prediction 142 162 - -
Sto8g1756 274 SMART sant 13 63 IPR001005 -
Sto8g1756 274 SMART sant 66 103 IPR001005 -
Sto8g1756 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 105 IPR017930 -
Sto8g1756 274 SUPERFAMILY Homeodomain-like 11 97 IPR009057 -
Sto8g1756 274 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto8g1756 274 MobiDBLite consensus disorder prediction 139 175 - -
Sto8g1756 274 Gene3D - 11 65 - -
Sto8g1756 274 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto8g1756 274 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1756 Sto-Chr8 11197418 11198480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1756 1 120 MYB Transcription Factor Family AT5G16600 70.229 9.69e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto8g1756 Myb_DNA-binding 2.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1756 K09422 - gmx:100783231 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1756 8 11197418 11198480 Sto8g1756 8 11197418 11198480 ECH