Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1731 ATGGCTGGAGTTGCTTCCTATGGAACAAGTCAATTGTGCTTTTTGCTAATGGTTTCTTTATACTTTGTTCAGACCTCTTCCTTTTTGTCATCCATCATTTCGAAGAAAGATGATATTGGTTCTACTGGCAGCAGGTCCTTAAGAGCTCTTGCATTAATTGGAGCTGGTGTCTCAGGGTTTTTGAGCTTTGCAACAACGGCAGCAGCTGATGAGGCTGAGCATGGCCTGGAATGTCCAAACTATCCTTGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTGGGATTCGCCGTGGTCATCAAGTTTATACAGAAGTCTGCGCTTCCTGCCATTCCATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCGTATACagaagaagaggtgaaggctatgGCAGCTGAGATTGAGGTGACTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAAGCAGCCGCTAGATCTAAGTCTTATTACCAAAGTAATGCATTTTCCCCTTGTATTGCTCGACACAACGGACAGAACTATGTATATGCCCTTCTTACTGGTTATCGTGATCCTCCCGCTGGTGTTTCGATTAGAGATGGATTGTACTATAATCCTTATTTTCCTGGTGGAGCAATCGCCATGCCTCAAATGCTTGTTGAAGGTGCTGTTGAATATGAAGATGGTACCCCTGCTACAGTATCTCAGATGGGAAAAGATGTCGTGACATTCCTATCTTGGGCTGCTGAACCTGAGATGGAGGAGAGAAAATTGATGGGTTTCAAATGGATTTTTGTACTATCGCTTGCACTGCTTCAAGCTGCTTATTTCCGCCGATTAAGATGGTCTGTTCTCAAGTCTCGCAAGCTGGTTGTTGATGTTGTCAACTAG 933 0.4352 MAGVASYGTSQLCFLLMVSLYFVQTSSFLSSIISKKDDIGSTGSRSLRALALIGAGVSGFLSFATTAAADEAEHGLECPNYPWPHKGILSSYDHAGIRRGHQVYTEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVTDGPNDEGEMFTRPGKLSDRFPQPYANEAAARSKSYYQSNAFSPCIARHNGQNYVYALLTGYRDPPAGVSIRDGLYYNPYFPGGAIAMPQMLVEGAVEYEDGTPATVSQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVVDVVN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1731 310 Gene3D - 266 309 - -
Sto8g1731 310 ProSiteProfiles Cytochrome c family profile. 95 182 IPR009056 GO:0009055|GO:0020037
Sto8g1731 310 SUPERFAMILY Cytochrome c 76 264 IPR036909 GO:0009055|GO:0020037
Sto8g1731 310 PRINTS Cytochrome C1 signature 81 100 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 PRINTS Cytochrome C1 signature 101 120 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 PRINTS Cytochrome C1 signature 146 166 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 PRINTS Cytochrome C1 signature 177 201 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 PRINTS Cytochrome C1 signature 215 226 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 PRINTS Cytochrome C1 signature 226 245 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 PRINTS Cytochrome C1 signature 246 265 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 PRINTS Cytochrome C1 signature 265 280 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 265 309 IPR021157 -
Sto8g1731 310 PANTHER CYTOCHROME C1 28 310 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 Pfam Cytochrome C1 family 83 297 IPR002326 GO:0009055|GO:0020037
Sto8g1731 310 Gene3D - 72 265 IPR036909 GO:0009055|GO:0020037
Sto8g1731 310 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 28 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1731 Sto-Chr8 11033068 11036334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1731 29 310 Chloroplast and Mitochondria Gene Families AT3G27240 78.201 6.77e-150 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1731 K00413 - gmx:100789781 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1731 8 11033068 11036334 Sto8g1731 8 11033068 11036334 ECH