Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1729 ATGCTTCCAGCTGATTCAATGAGACAGTTATACCTTTGTCTTCTGGTTCTCTTGTGGTTTTTGTCAATCCCAAGTAGCCATGAACTACAAGCTGCTCAGACCCAAGTCTTATTGCAGATAAGTAAGTATCTCGAGTATCCCGCCTCGcttcaaattttggaaaattataATGGTGACCTATGTAACGTTTCTTCATCTGCACACATGAGCATTAAATGTCAGGATAATTCTGTATCTGAGCTTAAAATTATGGGGGAAAAAACTACCAAGGTTAAGGAGTTCAATGGATTTGCAATTCCCAATCAAACACTGTCGGCGAGCTTCTCCATTGATTCTTTTGTCACCACGTTGTCGAGGTTGACCAGCTTAAGGGTTCTTAGCCTGGTGTCCTTGGGAATTTGGGGTCGTCTTCCAGACAAGATTCATCGATTATCTCTGCTCGAAGTTCTGGACATGAGCTCAAATTTCTTATTCGGTTCTATCCCACCGGAAATTTCCACAATGGTAAAGCTTCATACTCTAACGCTCGATGGAAATTATTTCAACGACAGTATGCCCGATTGGTTTGATTCGTTGTATAATCTAAATGTCTTGAGTATGAAAAGCAACAGGTTGAAGGGTTCATTCCCCGCTTCATTATGCAGAATTAAGACGCTCACTGATATTTCCTTATCTCACAATGAGCTGTCTGGTAAATTGCCAGATTTAAATGCTCTCTCTGGCCTACATGTGTTGGATTTAAGAGAAAACCGTTTAGATTCTGAACTGCCATTGATGCCCACGGAAGTGATCACAATTCTGCTAAGCAATAATTCATTTTCTGGCCAGATACCAAGGCAGTTTGGTGAATTGAATCAGCTTCAGCATTTAGATCTTTCATCAAATCATCTGAGTGGAATACCCCCATCTGCCTTGTTCTCGTTGTCAAACATCAGTTATTTAAATCTTGGAAGTAATATGCTGAGTGGGTCACTTCCTGATCAACTAAGTTGTGGCACCAAACTCGGGTTTGTGGATATTTCTAGTAACAAGTTTATTGGTGTACTGCCTTCTTGCTTGGCCAGTACATCCGATAGAAGAGTTGTCAAATATGGTGGAAATTGTTTATCTCTTGACTCTCAGCACCAGCAGCGAGAATCCTATTGTGAAGAATCCAGTATGGGAGGGAAGAAATTCAGGCAATGGAAAGTAGCTGTAGTAGCTGCCATTATTATTGGACttgttcttgttcttgttcttgTGCTTTCGGTGTTTGGAGTTTTCGTTTGTAGAAAATATCAGTCGAGAAAGACATCTGAACATCATTTGCTGCCAAAGCAAGATAATTCTACTACAGGGTTTTCATCTCAACTCCTCGCAAATGCCAgACTCATTTCTCAAGCGGTAAAGCTAGGGGCTCAAGCTACTCCATTCTGTCGACTGATTTCAATTGAAGAGTTGAAGGACGCCACCAGAAACTTTGACTCGTCAACGTTTATTGGTCAAGGCTCCTTAGGGAAGCTGTACAAAGGTAAATTGGAGAATGGATCCTACGTGGTGATACGATCTTTGTCTCTGTCAAAGAAATGCTCAATTCAAAATCTTAAAGCTCGGTTAGATTTACTCTCAAAGCTTCACCATCCAAATCTGGTTAGCCTCTTGGGTCATTGTATTGATGGTGGCGGACAAGAAGAgtttcctacccccaaacttcaTCTTGTTTATGAGTATGTGCCAAATGGGAATTATGGTGCCTATCTGTCAGAGTTCTCTCTGGAGAAGCCACTTAAGTGGTCTGATAGATTGACAATCTTAATTGGAGTTGCCAAAGCCGTACATTTTTTACATACTGGGGTTATTCCGGGTTGTTATAGTAACggattaaaaataaacaatattcTGCTTGATGAGCATCACTTTCCCAAACTAAGCGACTATGGGATGTCCATCCTCGGAGAAGAGATTGAAAGGCTTGAGGTATTTTTACTGGCTATTCAACTCAGCCAAAGGGCATTTGAGGATGATGTTTATAATTTCGGATTCATATTGCTTGAATCACTAGTTGGGCCCATAGCAAGCGGAAAAGGAGAAGCGTTTTTTCTAAATGAGAAGGCATCTTTTGGCAGTCATGATGGTAGAAGAAAGATTGTGGATCCTATAGTGTTGACCTCTTCCTCTCAAGAATCACTATCAATTGCAATATCTATAACCACCAAATGCATATCTCCAGAACCATCGTCTCGCCCCTCATTTGAGGATGTCCTATGGAACCTACAGTATGCAGCTCAAGTGCAGGCCACAGCAGATGCAGACCAGAAATCAGATTCTACATCCTAA 2316 0.3998 MLPADSMRQLYLCLLVLLWFLSIPSSHELQAAQTQVLLQISKYLEYPASLQILENYNGDLCNVSSSAHMSIKCQDNSVSELKIMGEKTTKVKEFNGFAIPNQTLSASFSIDSFVTTLSRLTSLRVLSLVSLGIWGRLPDKIHRLSLLEVLDMSSNFLFGSIPPEISTMVKLHTLTLDGNYFNDSMPDWFDSLYNLNVLSMKSNRLKGSFPASLCRIKTLTDISLSHNELSGKLPDLNALSGLHVLDLRENRLDSELPLMPTEVITILLSNNSFSGQIPRQFGELNQLQHLDLSSNHLSGIPPSALFSLSNISYLNLGSNMLSGSLPDQLSCGTKLGFVDISSNKFIGVLPSCLASTSDRRVVKYGGNCLSLDSQHQQRESYCEESSMGGKKFRQWKVAVVAAIIIGLVLVLVLVLSVFGVFVCRKYQSRKTSEHHLLPKQDNSTTGFSSQLLANARLISQAVKLGAQATPFCRLISIEELKDATRNFDSSTFIGQGSLGKLYKGKLENGSYVVIRSLSLSKKCSIQNLKARLDLLSKLHHPNLVSLLGHCIDGGGQEEFPTPKLHLVYEYVPNGNYGAYLSEFSLEKPLKWSDRLTILIGVAKAVHFLHTGVIPGCYSNGLKINNILLDEHHFPKLSDYGMSILGEEIERLEVFLLAIQLSQRAFEDDVYNFGFILLESLVGPIASGKGEAFFLNEKASFGSHDGRRKIVDPIVLTSSSQESLSIAISITTKCISPEPSSRPSFEDVLWNLQYAAQVQATADADQKSDSTS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1729 771 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 770 - -
Sto8g1729 771 PANTHER OS07G0166700 PROTEIN 10 770 IPR045272 GO:0004714|GO:0006468
Sto8g1729 771 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Sto8g1729 771 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Sto8g1729 771 Gene3D Ribonuclease Inhibitor 30 262 IPR032675 -
Sto8g1729 771 SUPERFAMILY Protein kinase-like (PK-like) 469 751 IPR011009 -
Sto8g1729 771 SUPERFAMILY L domain-like 117 369 - -
Sto8g1729 771 Gene3D Phosphorylase Kinase; domain 1 449 570 - -
Sto8g1729 771 Gene3D Ribonuclease Inhibitor 263 391 IPR032675 -
Sto8g1729 771 Gene3D Transferase(Phosphotransferase) domain 1 572 770 - -
Sto8g1729 771 Pfam Protein tyrosine and serine/threonine kinase 492 748 IPR001245 GO:0004672|GO:0006468
Sto8g1729 771 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Sto8g1729 771 SMART LRR_typ_2 308 332 IPR003591 -
Sto8g1729 771 SMART LRR_typ_2 239 262 IPR003591 -
Sto8g1729 771 SMART LRR_typ_2 284 307 IPR003591 -
Sto8g1729 771 SMART LRR_typ_2 144 168 IPR003591 -
Sto8g1729 771 ProSiteProfiles Protein kinase domain profile. 487 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1729 Sto-Chr8 11019884 11023441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1729 7 696 Miscellaneous Gene Families AT5G14210 58.571 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Sto8g1729 PK_Tyr_Ser-Thr 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1729 - - gmx:100784640 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1729 8 11019884 11023441 Sto8g1729 8 11019884 11023441 ECH
Sto8g1729 8 11019884 11023441 Sto13g0452 13 3916535 3924265 ECH