Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1725 ATGATGACTAAGTTCCATCTGAGAGCTTTGGTCTTTTCGTTATGCTTCTTTGTCCCCTCCTCACTTGGAGAAGAAGGCATAATCAGTGGGAATGAATCACAGATCCAACAATGTGGAACATTTGCAATTCTTCGCACTAATTCACACTTCTCATCTCTCTTCAACTTGAGCTTCTACTTGGGATTCAATCGCTATGTGATTGCAGAAGCAAATGGTTTCTCTGCAGAAACAGAGTTTCTCTCCCAGCAACAACCTCTGTTATTACCTATAGACTGCAAATGCAGCAAAAATGGCTTCTTTGGAGCTGAATTGACCAAAACCACCATTAAAGGTGAGAGCTTTTCTGGTATTGCTGAATCACTCGAGGGCTTGACAACCTGCAAGGCCATTCTTGATAAGAACCCAGGTGTGTCACCTTGGGATCTTGATGACAAACTCAGATTGTTAATCCCACTTAGATGTTCTTGCCCTTTTTCATCTATACTTAGTCCAAAGCCAAACCTTCTGGTTTCTTATCCAGTAAGTGAAGGTGATACAGTTCTGAATTTGGCAtcaaagttcaatactaccccAGAAGCAATAACCTCTGCAAATAACATATCCTCACAAGATAATCTCACACCCTTTACCTCTCTTCTAATCCCACTCAATGGTGAGCCTATTCTAGATTCTCTGGCTAAACCCAGTGAACCCAATTCGGGTAATTCTACATCATCATCAAGCAGCATCATCCCAGTGATTAGTCCACACAAGAAGTCCAAAATGTGGAAGGCTGAATTGTACATTGGTCTAGCTGGGGTTGTAGTTGGAGTGTGCATTGCTATTCTAGCAGCTTTCGTTGTGATCCGATTGAAGAACGTGAAGAAAGAGAAATCCAGCAGCAAAACAGGGGATTTGGAGTTGCAACATCTTAATCTCAGCGTGAGAACCACCAGTGACAAGAAAGTCTCATTCGAGGGATCCCATGATGGGAAACTCACCACAGACACCACTCCTCATAAGATGATGATGCTGCTAGAGACATACACCATTGAGGAGCTGAGAAAAGCAACGGAGGATTTCAACTCAAGCAACCACATAGAAGGATCCGTCTTCCACGGCGTTCTAAACGGGAAAAACATGGCAATCAAACGTGAAAAGACAAAAACAGTCTCAAAAATAGATCTTTCCCTCTTCCACAACAACACAATCCACCACCCCAACATCCTCAAACTCCTCGGAACCTGTCTCACCGAAGGCTCCGAATCCTTCCTCGTATTCGAGTACGCCAAAAACGGGTCCCTCAAGGACTGGCTCCACGGTGGGTTAGCCATAAAGAACCAATTCATCTCTTCCTGCTATTGCTTCCTCACATGGAGCCAGAGGATCAGAATCTGCCTCGACGTGGCCATGGCCTTGCAGTATATGCACCACGTCATGAACCCAAGCTACGTCCATAGAAACGTGAAGAGCAGGAACATCTTCCTGGACGAAGAATTCGGCGCAAAGTTAGGAAATTTCGGGATGGCAGGTTGCGTAGAAAACGACACAGAGGATCCAAATTTCTACTCAACAAACCCAGCTTCATGGAGTCTAGGATATCTAGCACCAGAATATGTACACCAAGGTATAATCTCCCCAAGCATCGATATTTTCGCTTATGGGGTGGTTTTGCTGGAAGTTCTATCTGGTCAGACACCTATAAGCAGACCCAATGAGAAAGGGGAAGGCAGCGTTTGGGTGACAGATAAAGTGAAAGCAGTTTTGAAGTCAGAGGATGTGGGTGAAGTGAGGGAGTGGATGGACAGTGCATTGGGTGAGAATTATTCGTTTGATGCTGCGGTGAGAGTGGCGAACATCGCAAGGGCGTGTGTGGAGGAAGATTGTAGTATGAGGCCAAGTGCAGGGGAGATTGTGGAGAAGCTATCAAGATTGGTGGAGGAATTAGCAGAGGAAGATCAGATGTTGATGTGTGAGAGTTCTTGCAAGCCTCTGGTGAAGGCAGTGAAGTAA 1992 0.4468 MMTKFHLRALVFSLCFFVPSSLGEEGIISGNESQIQQCGTFAILRTNSHFSSLFNLSFYLGFNRYVIAEANGFSAETEFLSQQQPLLLPIDCKCSKNGFFGAELTKTTIKGESFSGIAESLEGLTTCKAILDKNPGVSPWDLDDKLRLLIPLRCSCPFSSILSPKPNLLVSYPVSEGDTVLNLASKFNTTPEAITSANNISSQDNLTPFTSLLIPLNGEPILDSLAKPSEPNSGNSTSSSSSIIPVISPHKKSKMWKAELYIGLAGVVVGVCIAILAAFVVIRLKNVKKEKSSSKTGDLELQHLNLSVRTTSDKKVSFEGSHDGKLTTDTTPHKMMMLLETYTIEELRKATEDFNSSNHIEGSVFHGVLNGKNMAIKREKTKTVSKIDLSLFHNNTIHHPNILKLLGTCLTEGSESFLVFEYAKNGSLKDWLHGGLAIKNQFISSCYCFLTWSQRIRICLDVAMALQYMHHVMNPSYVHRNVKSRNIFLDEEFGAKLGNFGMAGCVENDTEDPNFYSTNPASWSLGYLAPEYVHQGIISPSIDIFAYGVVLLEVLSGQTPISRPNEKGEGSVWVTDKVKAVLKSEDVGEVREWMDSALGENYSFDAAVRVANIARACVEEDCSMRPSAGEIVEKLSRLVEELAEEDQMLMCESSCKPLVKAVK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1725 663 ProSiteProfiles Protein kinase domain profile. 333 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1725 663 SMART LysM_2 171 215 IPR018392 -
Sto8g1725 663 ProSiteProfiles LysM domain profile. 170 214 IPR018392 -
Sto8g1725 663 PANTHER PROTEIN LYK2 30 662 - -
Sto8g1725 663 SUPERFAMILY Protein kinase-like (PK-like) 332 635 IPR011009 -
Sto8g1725 663 Pfam Protein kinase domain 362 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1725 663 Gene3D Transferase(Phosphotransferase) domain 1 423 656 - -
Sto8g1725 663 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 30 662 - -
Sto8g1725 663 SUPERFAMILY LysM domain 170 215 IPR036779 -
Sto8g1725 663 Gene3D Phosphorylase Kinase; domain 1 325 422 - -
Sto8g1725 663 Gene3D LysM domain 159 221 IPR036779 -
Sto8g1725 663 CDD LysM 170 214 IPR018392 -
Sto8g1725 663 Pfam LysM domain 172 215 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1725 Sto-Chr8 10994981 10997017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1725 33 660 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.854 4.58e-152 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto8g1725 Pkinase 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1725 - - gmx:100816082 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1725 8 10994981 10997017 Sto8g1725 8 10994981 10997017 ECH