Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1719 ATGGGGGAGGACTCTAAGCAGCTTGGAGAATCAATCATGAAGTCGTGCAACGTCATAgaggaacaagaagaagagagagaccCAGAAAGCAATTCATTGAATCAGCCATTGCTGAAGAGAAATCGGACCTTGTCTTCTACTCCACTTGCGCTGGTTGGAGCAAAAGTTTCTTACATAGAAAGCTTGGACTATGAGATAAACGAGAATGAATTATTCAAGCAGGACTGGAGGAGCAGATCCAGAGTCCAAATATTGCAGTATATATTCTTGAAGTGGTTGCTGGCCTTCCTTGTGGGACTTCTTACTGGTCTCATAGCAACTTTGATTAATCTTGCCATTGAGAATATTGCTGGATACAAGATTCTCGCAGTTGTTGATTACATTCATCAAGAAAGGTACTTGGCGGGGTTCCTATATTTCTGTGGGTTTAATTTCGTATTAACTTTGGTGGCGTCTGTACTGTGCGTGTGTTTTGCACCAACGGCAGCAGGGCCAGGAATACCTGAAATCAAGGCTTATCTGAATGGCGTAGATACTCCCAATATGTATGGTCCTACAACGTTGATCGTCAAGATAATTGGAAGCATTGGAGCAGTGGCCGCAGGCCTAGACTTGGGAAAAGAAGGACCCTTGGTACATATCGGAAGCTGCATTGCTTCCATACTAGGGCAAGGGGGGACTGATAAATACCAGATCAAATGGCGCTGGCTTCGATATTTCAACAATGATCGTGATCGTCGTGATCTTATTACCTGCGGTGCCTCTTCAGGGGTTTGTGCAGCTTTCCGGGCACCTGTTGGTGGAGTTCTGTTCTCTCTAGAAGAGGTGGCAACCTGGTGGAGAAGTTCTCTCCTCTGGAGAACATTTTTCAGCACAGCTGTGGTGGTGGTAGTGCTCAAGGGCTTCATTCAACTCTGCAACTCCGGGAAATGTGGACATTTTGGGCAAGGAGGGTTGATCATATTTGATGTCAGCAATGTTACTGTGAGTTACCAATTGATGGATATCATCCCTGTTACAATCATTGGAATCCTTGGCGGGGTATTGGGAAGCCTTTATAACCATCTTCTCCACAAGGTCCTCAGACTCTACAATCTCATCAATCAGAAGGGAAGGATACATAAGCTTCTTCTCAGTCTTGCAGTTGCAATCTTCACATCAGTTTGCCAATATGGTCTCCCATTCCTTGCTAAATGCACCCCGTGTGATCCATCACTTCCAGAATCTGTCTGTCCCACCAATGGACGATCTGGAAATTTCAAACAATTTAATTGCCCAAAGGGCCACTACAATGATCTTGCTACTCTACTCCTTACCACCAATGATGATGCTGTTCGAAACATATTCTCAAGCAACACTCCTCACGAATTTTATACCTcctctctcctaattttcttTGTGCTTTATTGTATACTAGGTCTCATTACTTTTGGCATTGCTGTGCCCTCTGGCCTCTTTCTCCCAATCATCCTTATGGGTTCAGGTTATGGCCGTCTTCTGGGCATGTTTATGGGACCACATACAAACATTGACCAAGGGCTATTTGCCGTTCTTGGCGCAGCCTCCCTCATGGCTGGTTCAATGAGGATGACTGTATCCCTATGTGTTATATTCCTTGAACTCACCAACAACCTTCTCCTACTACCAATAACAATGTTTGTTCTCCTAATTGCCAAAACAGTTGGAGACAGTTTCAACCGAAGCATCTATGAGATTATACTCGATTTAAAAGGTCTTCCTTTCTTGGAAGCAGCTCCTGAACGATGGATGAGAAACCTCACTGTAGGTGAGCTTGTTGACGTCAAACCAGCAGTGGTTACCCTCCATGGAGTAGAAAAAGTAGCTCATATAGTAGATGTATTGAGAAACACAACACATAATGGTTTCCCAGTTGTGGATGAAGGATTGGCACTACCAACAGGAGTGACCAATGGGGCAACAGAAGTTCATGGCCTGATCCTAAGAACACACCTCATCCAAGCGCTTAAAAAGAAGTGGTTCTTGAAAGAGAAAAGGAGAACTGAGGACTGGGAAGTCAGAGAAAAATTTACCTGGGTAGAGCTGGCTGAGAGAGAAACTAATATTGAAGAGGTGGCTGTGAACAGGGAGGAAATGGAGATGTTTGTTGATTTACATCCTCTAACCAATACAACTCCCTATACAGTGCTAGAGAGCGTGTCAGTGGCAAAAGCAATGGTACTCTTCAGGCAAGTAGGACTTCGCCATCTGCTCGTGCTACCCAAATATCAAGCATCAGGGGTAACTCCGGTAATTGGGATCTTGACCAGACAGGATCTACTAGCCCACAACATTTTGGCAGTCTTTCCTAACCTGGCAAAATCTAATGGCagagaaaataagaaaggaagATCTCATTGA 2379 0.4334 MGEDSKQLGESIMKSCNVIEEQEEERDPESNSLNQPLLKRNRTLSSTPLALVGAKVSYIESLDYEINENELFKQDWRSRSRVQILQYIFLKWLLAFLVGLLTGLIATLINLAIENIAGYKILAVVDYIHQERYLAGFLYFCGFNFVLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGPTTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASILGQGGTDKYQIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSSLLWRTFFSTAVVVVVLKGFIQLCNSGKCGHFGQGGLIIFDVSNVTVSYQLMDIIPVTIIGILGGVLGSLYNHLLHKVLRLYNLINQKGRIHKLLLSLAVAIFTSVCQYGLPFLAKCTPCDPSLPESVCPTNGRSGNFKQFNCPKGHYNDLATLLLTTNDDAVRNIFSSNTPHEFYTSSLLIFFVLYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGMFMGPHTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDSFNRSIYEIILDLKGLPFLEAAPERWMRNLTVGELVDVKPAVVTLHGVEKVAHIVDVLRNTTHNGFPVVDEGLALPTGVTNGATEVHGLILRTHLIQALKKKWFLKEKRRTEDWEVREKFTWVELAERETNIEEVAVNREEMEMFVDLHPLTNTTPYTVLESVSVAKAMVLFRQVGLRHLLVLPKYQASGVTPVIGILTRQDLLAHNILAVFPNLAKSNGRENKKGRSH 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1719 792 Pfam Voltage gated chloride channel 148 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g1719 792 PANTHER CHLORIDE CHANNEL PROTEIN 10 782 - -
Sto8g1719 792 SUPERFAMILY CBS-domain pair 586 768 IPR046342 -
Sto8g1719 792 CDD CBS_pair_voltage-gated_CLC_euk_bac 602 769 - -
Sto8g1719 792 PRINTS Chloride channel signature 160 177 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g1719 792 PRINTS Chloride channel signature 191 210 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g1719 792 PRINTS Chloride channel signature 255 274 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g1719 792 PRINTS Chloride channel signature 481 501 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g1719 792 PRINTS Chloride channel signature 513 529 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g1719 792 PRINTS Chloride channel signature 531 550 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g1719 792 PRINTS Chloride channel signature 569 583 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g1719 792 ProSiteProfiles CBS domain profile. 601 670 IPR000644 -
Sto8g1719 792 CDD ClC_6_like 60 582 - -
Sto8g1719 792 PRINTS Plant CLC chloride channel signature 65 73 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g1719 792 PRINTS Plant CLC chloride channel signature 276 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g1719 792 PRINTS Plant CLC chloride channel signature 290 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g1719 792 PRINTS Plant CLC chloride channel signature 308 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g1719 792 PRINTS Plant CLC chloride channel signature 433 449 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g1719 792 Gene3D - 584 774 IPR046342 -
Sto8g1719 792 Pfam CBS domain 602 663 IPR000644 -
Sto8g1719 792 Gene3D Clc chloride channel 83 583 - -
Sto8g1719 792 SUPERFAMILY Clc chloride channel 69 584 IPR014743 -
Sto8g1719 792 ProSiteProfiles CBS domain profile. 715 781 IPR000644 -
Sto8g1719 792 SMART cbs_1 718 771 IPR000644 -
Sto8g1719 792 SMART cbs_1 604 663 IPR000644 -
Sto8g1719 792 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 10 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1719 Sto-Chr8 10960829 10964845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1719 24 792 Ion Channels AT3G27170 78.674 0.0 1237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1719 K05016 - gmx:100788620 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1719 8 10960829 10964845 Sto8g1719 8 10960829 10964845 ECH