Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1696 ATGGCGATGGATGTGGAGGAGAAAGTAGAGTCAGGGTTTCCATACTGGAAAGCCGTTTGTCGCAGGTTCGCCCCGGACTCTCCTTTCTTTGCTTCCGGCAACGTCGAACGGGAACTTCTTGCTAAGCAGGTTGCTTTGGAGTTAACAGCTGAAGAGAAGCAACAGCTTCAGAATTTGGTACTAGAGGAAGTCAGGGAAGTCTTCTGTCCCATTGTTGGTTGTGGAGCACGCCTGACTTCTTTGGAGGACTTTGAAAATCATTATAATGCACGGCACACTGCTTCTTGCTCAGTATGTTCTAGAGTCTTCCCAACATCTCGCCTGCTGAGCATACATGTATCTGAAGTGCATGATTCGTTCTTTCAGGCAAAGGCTGCTCGTGGCTATGATGTGTATGAATGCTTAGTGGAAGGGTGTGGTTTGAAGTTTAAAAGCTACAAGAGTAGGCAACAGCATCTGGTTGACAAGCATAAATTCCCCATCACATTCGAGTTTTTCAAGAAGGCTCGGCCATCAAAGAAACAGAGGCAGAAGACCCAACGAAAACAAGCTACACATAAGGAAAATGCTTCTAGAACAATGGAAGTGGATAATACAACCCTAGATGGCCTTGTATCCGCCGTCTCTAAATTGAGTACTTCTGACTCCACTCCATCGTCTGTCAGCTTTGGTCGCCGGCACACCCGTGGTTTGACATTTGTCCCTCGTGCTGTTCAGCGTGAAAGTGGATCAAACTCAACATCTCCTAGAACAAAGCAATAA 762 0.4646 MAMDVEEKVESGFPYWKAVCRRFAPDSPFFASGNVERELLAKQVALELTAEEKQQLQNLVLEEVREVFCPIVGCGARLTSLEDFENHYNARHTASCSVCSRVFPTSRLLSIHVSEVHDSFFQAKAARGYDVYECLVEGCGLKFKSYKSRQQHLVDKHKFPITFEFFKKARPSKKQRQKTQRKQATHKENASRTMEVDNTTLDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVQRESGSNSTSPRTKQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1696 253 Pfam Zinc finger, C2H2 type 96 117 IPR013087 -
Sto8g1696 253 PANTHER ZINC FINGER PROTEIN 511 10 242 - -
Sto8g1696 253 Gene3D Classic Zinc Finger 36 122 - -
Sto8g1696 253 ProSitePatterns Zinc finger C2H2 type domain signature. 96 117 IPR013087 -
Sto8g1696 253 MobiDBLite consensus disorder prediction 169 197 - -
Sto8g1696 253 MobiDBLite consensus disorder prediction 210 226 - -
Sto8g1696 253 MobiDBLite consensus disorder prediction 238 253 - -
Sto8g1696 253 SMART c2h2final6 67 92 IPR013087 -
Sto8g1696 253 SMART c2h2final6 94 117 IPR013087 -
Sto8g1696 253 SMART c2h2final6 132 157 IPR013087 -
Sto8g1696 253 MobiDBLite consensus disorder prediction 210 253 - -
Sto8g1696 253 PANTHER UNCHARACTERIZED 10 242 IPR039258 -
Sto8g1696 253 ProSitePatterns Zinc finger C2H2 type domain signature. 134 157 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1696 2 248 C2H2 Transcription Factor Family AT5G14140 66.275 2.26e-122 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto8g1696 zf-C2H2 0.011 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1696 - - pvy:116145577 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1696 8 10868912 10870706 Sto8g1696 8 10868912 10870706 ECH