Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1685 atGGAGAACTATCCGATGTTGTTCCCTTGTCCTAATCCTAATTCTAGTAATTATCCGATTTCTTCCACGAGTGGGTCTGTTGAAGGATTAATGAGGAATTTTGAGGGTGAGAACTCGAATAATAATGGTGGATTTCTGGGATTGAGGCCTAGTCATGATGATTTGGAGAAAAGATCATCGTCATCAGGAGTAGGAGAAGGCAAGAGTAGTGAAGAAGGAGGAGGTGGGGGTAATTCGGGAAAGATGAAGAAAGGGGAGAAGAAAGCGAGAAAGCCTAGATATGCTTTTCAAACAAGGAGTCAAGTGGATATACTTGATGATGGCTATCGATGGAGAAAATATGGCCAAAAGGCCGTCAAAAACAACAAATTCCCCAGGAGCTACTACAGGTGTACTCATCAAGGATGCAATGTGAAGAAGCAAGTGCAACGATTAACAAAAGACGAAGGGGTAGTGGTGACCACATACGAGGGAGTGCACAACCACCCAATCGAGAAGACCACTGATAACTTCGAACACATTTTGAGCCAGATGCAAATTTACACTCCCTTTTAA 555 0.4288 MENYPMLFPCPNPNSSNYPISSTSGSVEGLMRNFEGENSNNNGGFLGLRPSHDDLEKRSSSSGVGEGKSSEEGGGGGNSGKMKKGEKKARKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHNHPIEKTTDNFEHILSQMQIYTPF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1685 184 Pfam WRKY DNA -binding domain 106 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g1685 184 Gene3D WRKY domain 89 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g1685 184 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 76 180 - -
Sto8g1685 184 SUPERFAMILY WRKY DNA-binding domain 97 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g1685 184 MobiDBLite consensus disorder prediction 9 46 - -
Sto8g1685 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 180 IPR044810 GO:0003700
Sto8g1685 184 MobiDBLite consensus disorder prediction 1 93 - -
Sto8g1685 184 ProSiteProfiles WRKY domain profile. 100 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g1685 184 SMART WRKY_cls 105 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1685 Sto-Chr8 10807801 10809211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1685 93 184 WRKY Transcription Factor Family AT5G13080 88.043 6.86e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto8g1685 WRKY 2.1e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1685 8 10807801 10809211 Sto8g1685 8 10807801 10809211 ECH