Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1682 ATGGCGACCTCACCGTTTGGCTTGCGCCTGCTCAAATCACCAATCTCTGCCGCTCCTATGTCACGCGTTAGTTCCAGgtTGGAATTTCCAAGAGTCCAAATTCTCAGAGTCAACTGTGACTACTCCTGCTTTGAAGTTAGAGATGTTAGCTATCATCCCCCAGGGACTCAGCTCAGCCTTTTGAAGTCAATTAGTTTTTCGCTTCCTGAGAAAAGTTTTGGCATAATTTTTGGACAGAGTGGAAGTGGAAAAACAACTCTCTTGCAGCTTCTTGCAGGAATAACCAAACCAACCTCTGGGTCCATTTACATCCAAAAATATGGGAAGGATGGCAACCCAAGTCAATCTCCACAGCCCTTGGTACCAGAAAGGGTTGGTATTGTGTTCCAGTTTCCTGAGAGGTACTTTGTCGCTGATAATGTGCTCGATGAAGTCACTTTTGGGTGGCCAAGACTAAAGGGTGACTATCAATTGAAGGAGCATCTTGCTTTAAGACTCCAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATCTCCTTGGATAAAGACCCTCACTCCCTTAGTGGTGGTTATAAGCGCCGTCTAGCCTTGGCCATACAATTGGTTAATATCCCTGACCTATTGATATTGGATGAGCCTCTTGCTGGCCTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTTTGAAGCATCTGAAAAAGGAATTAACTGTGCTAGTTGTTAGTCACGATTTGAGAGAGTTAGCAAATTTAGTTGATAGATCGTGGAGGATGGAAATGGGTGGCAGTCTTAAGGAGGAGTCACTACCATTATAA 816 0.4449 MATSPFGLRLLKSPISAAPMSRVSSRLEFPRVQILRVNCDYSCFEVRDVSYHPPGTQLSLLKSISFSLPEKSFGIIFGQSGSGKTTLLQLLAGITKPTSGSIYIQKYGKDGNPSQSPQPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRLKGDYQLKEHLALRLQRAINWVGLSGISLDKDPHSLSGGYKRRLALAIQLVNIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLRELANLVDRSWRMEMGGSLKEESLPL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1682 271 Pfam ABC transporter 61 214 IPR003439 GO:0005524
Sto8g1682 271 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 28 268 - -
Sto8g1682 271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 271 IPR003439 GO:0005524
Sto8g1682 271 SMART AAA_5 70 262 IPR003593 -
Sto8g1682 271 CDD ABC_cobalt_CbiO_domain1 45 261 IPR015856 GO:0005524|GO:0016020|GO:0055085
Sto8g1682 271 PANTHER HEAVY METAL TRANSPORTER 28 268 - -
Sto8g1682 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 262 IPR027417 -
Sto8g1682 271 Gene3D - 36 269 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1682 Sto-Chr8 10791690 10795702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1682 45 252 Calmodulin-binding Proteins AT2G36910 25.346 2.27e-10 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1682 8 10791690 10795702 Sto8g1682 8 10791690 10795702 ECH