Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1678 ATGGATCCCAAGGGCTCAAAGCAAGCACCGCAGGAGGCAGCACCAAACTCGTCGTTGCCACAAACGAAGATGGGAGAGAAGGCAGCAGAAATCAAGGATTTCCAGATTGCGATTGCAGATAAAGAAGACGCCACCAAGAAGCAGCTCGCCCCCAAGAGAACCTCCAACAAAGACAGACACACCAAAGTCGAAGGCAGGGGACGCAGGATACGCATGCCCGCGCTTTGCGCCGCCAGAATCTTCCAGTTGACCCGCGAGCTGGGCCACAAATCCGACGGCGAGACTATTCAGTGGCTTCTCCAGCAGGCGGAGCCCTCGATCATCGCCGCCACCGGGTCGGGGACCATCCCGGCTTCGGCTCTGGCCATTGCGGCGGGTGGGTCGCAACAGGGGACGTCTGTGTCGGCAGGATTGCATCATCAGAAAATGGATGAGTTTGGGGGGTCCAATAGTAGTAGGGCCGGGTGGGCTATGGTGAGCGGAAATCTGCAAGGAAGACCCCATATGGCTACGGGAGTATGGCCCCCAGTCAGTGGATTTGGATTCCACTCTTCTTCGGCTCCATCTCCATCCACACCAAGCTTAGCCACTGATAGTTCTAATTACCTTCAAAAGATTGCTTTCCCTGGCTTTGACTTGCCTTCTGCACCACCCACCAACATGGGTGCTATGAGCTTCACCTCAATTTTGGGTGGGAGTAACCACCACATGCCTGGCTTGGAGTTAGGTGGTTTGGATGCACTCAAAGGTGCTGTTGATTAG 762 0.5538 MDPKGSKQAPQEAAPNSSLPQTKMGEKAAEIKDFQIAIADKEDATKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALAIAAGGSQQGTSVSAGLHHQKMDEFGGSNSSRAGWAMVSGNLQGRPHMATGVWPPVSGFGFHSSSAPSPSTPSLATDSSNYLQKIAFPGFDLPSAPPTNMGAMSFTSILGGSNHHMPGLELGGLDALKGAVD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1678 253 MobiDBLite consensus disorder prediction 1 27 - -
Sto8g1678 253 ProSiteProfiles TCP domain profile. 56 110 IPR017887 -
Sto8g1678 253 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 26 243 - -
Sto8g1678 253 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 243 IPR005333 GO:0003700
Sto8g1678 253 Pfam TCP family transcription factor 54 144 IPR017887 -
Sto8g1678 253 MobiDBLite consensus disorder prediction 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1678 Sto-Chr8 10764289 10767076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1678 30 243 TCP Transcription Factor Family AT3G27010 57.399 6.99e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto8g1678 TCP 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1678 - - vvi:100253170 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1678 8 10764289 10767076 Sto8g1678 8 10764289 10767076 ECH