Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1674 ATGGCACCCAAGAAAAGTGGAAAGGCTCCGGCGGCGGCTGCCAAGAAGAAGGCGGACAAGGTGGTGAACCCACTGTTCGAGAAGCGTCCGAAGCAGTTTGGAATTGGAGGGGCATTGCCTCCGAAGAGGGACCTAACCAGATTCGTCAAGTGGCCTAAGACCGTTCAGATTCAGAGAAAGAAGAGGATTCTTAAGCAAAGGTTGAAGGTCCCACCAGCTTTAAACCAGTTTACCAAAACACTTGACAAGAACCTTGCAACAAACTTGTTCAAGATGCTTCTCAAGTACAGGCCTGAGGATAAAGCTGAAAAGAAAGAGCGTCTTTTGAAGAGGGCTCAAGCTGAGGCAGAAGGCAAAACTGTTGAAGCTAAGAAGCCAATTGTTGTGAAATATGGTCTTAATCACGTTACATACCTTATTGAGCAGAACAAAGCACAGCTGGTTGTAATTGCCCATGATGTGGACCCAATTGAACTGGTTGTCTGGCTTCCAGCATTGTGCAGGAAGATGGAAATTCCCTACTGCATTGTCAAGGGCAAGGCACGCTTGGGATCGATTGTCCATAAGAAAACTGCATCAGTTTTGTGCCTGACAACTGTTAAGAACGAAGACAAACTAGAATTCTCCAAGATATTAGAGGCTATCAAGGCCAACTTCAACGACAAGTATGATGAGTACCGAAAGAAATGGGGTGGTGGGATTATGGGTTCCAAATCCCAAGCCAGAACCAAGGCCAAGGAAAGACTCCTTGCCAAGGAAGCAGCGCAGAGGATGACCTAG 780 0.4679 MAPKKSGKAPAAAAKKKADKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAEKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMT 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1674 259 ProSitePatterns Ribosomal protein L7Ae signature. 167 184 IPR004037 GO:0042254|GO:1990904
Sto8g1674 259 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 257 - -
Sto8g1674 259 PANTHER - 2 257 - -
Sto8g1674 259 Coils Coil 102 122 - -
Sto8g1674 259 PRINTS Ribosomal protein L7A/RS6 family signature 129 143 IPR018492 -
Sto8g1674 259 PRINTS Ribosomal protein L7A/RS6 family signature 148 161 IPR018492 -
Sto8g1674 259 PRINTS Ribosomal protein L7A/RS6 family signature 164 174 IPR018492 -
Sto8g1674 259 PRINTS Ribosomal protein L7A/RS6 family signature 174 188 IPR018492 -
Sto8g1674 259 PRINTS Ribosomal protein L7A family signature 30 47 IPR001921 -
Sto8g1674 259 PRINTS Ribosomal protein L7A family signature 47 64 IPR001921 -
Sto8g1674 259 PRINTS Ribosomal protein L7A family signature 67 86 IPR001921 -
Sto8g1674 259 PRINTS Ribosomal protein L7A family signature 91 104 IPR001921 -
Sto8g1674 259 PRINTS Ribosomal protein L7A family signature 125 145 IPR001921 -
Sto8g1674 259 PRINTS Ribosomal protein L7A family signature 186 210 IPR001921 -
Sto8g1674 259 PRINTS Ribosomal protein L7A family signature 218 238 IPR001921 -
Sto8g1674 259 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 116 206 IPR004038 -
Sto8g1674 259 SUPERFAMILY L30e-like 89 230 IPR029064 -
Sto8g1674 259 Gene3D - 51 234 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1674 Sto-Chr8 10737712 10740350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1674 1 259 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 84.556 1.91e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1674 K02936 - qsu:112034677 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1674 8 10737712 10740350 Sto8g1674 8 10737712 10740350 ECH
Sto8g1674 8 10737712 10740350 Sto13g0526 13 4700722 4702809 ECH