Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1672 ATGAATGTTGCTGGCCGACATATAACATCATATCTTGTTGACTTGCTTTCAAGAAGGGGGTATGCGATGAATAGGAATGCTGATTTTGAGACTCTTCCAGATGGAAGGGTGATTAAAGTAGGCACTGAAAGGTTCCAGGCTCCTGAGGCTCTTTTCACTCCAGAACTCATAGATGTTGAAGGTGATGGAATGGCAGACATGGTATTTCGTTGCATTCAAGAAATGGATATTGACAACCGGATGATGGATCCACCACGTAGGAAGCACATGGTGTATCTCGGAGGAGCTGTCCTTGCAGGAATTATGAAGTTCTGGATTAACCGGGAAGACTATCTAGAAGAAGGAGTTGCTTGTCTAAGCAGATGTGGCCAGGCATGA 378 0.4471 MNVAGRHITSYLVDLLSRRGYAMNRNADFETLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMDPPRRKHMVYLGGAVLAGIMKFWINREDYLEEGVACLSRCGQA 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1672 125 Gene3D - 99 116 - -
Sto8g1672 125 Gene3D - 81 98 - -
Sto8g1672 125 Gene3D - 62 80 - -
Sto8g1672 125 Pfam Actin 29 80 IPR004000 -
Sto8g1672 125 PANTHER ACTIN-RELATED PROTEIN 2 31 81 - -
Sto8g1672 125 PANTHER ACTIN-RELATED PROTEIN 2 1 31 - -
Sto8g1672 125 PANTHER ACTIN-RELATED PROTEIN 2 80 121 - -
Sto8g1672 125 PANTHER ACTIN 1 31 IPR004000 -
Sto8g1672 125 PANTHER ACTIN 31 81 IPR004000 -
Sto8g1672 125 PANTHER ACTIN 80 121 IPR004000 -
Sto8g1672 125 SUPERFAMILY Actin-like ATPase domain 2 120 IPR043129 -
Sto8g1672 125 Gene3D Actin; Chain A, domain 4 31 61 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1672 1 121 Cytoskeleton Gene Families AT3G12110 26.154 1.95e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1672 K17260 - pvu:PHAVU_001G089600g 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1672 8 10723640 10729162 Sto8g1672 8 10723640 10729162 ECH