Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1667 atgatcAATTCACTTTGCGGGAGCTCCTTGTCCCTCAAGAGTGAGAACTCATGCAACAAACTTCAACCCACTTCTTCTTCAAACGAGTCAGGTTTGTTGCAGTGTAAGAAAAGTGGGACTACTCAATCCTCTGAGCAATTAGATGATCAGACGAATAGCCTAACCCCACCAAGCTTAAACCTTCCTGCATTCAAATTCGACTTGGATGGAGACGTGGAAGTCCAATCACCAGACAGTTCTATGTGGGAGTCGTTCTTCTCGGATCAGTTAGAGGCAGACTTCATGATCTCTTCACCGGTGAGGAATATGCCTTCCCCACAAGCTTCTACCTACAACTGCAACTACAACTATGCTCAGGCAATGCAGGGGCAGAGTGTGTCTGGGTGTTCACCTCCTCGCTTCTCCTCCCAAATTGGGGCATTCAGCAGCACCCACAAGGGGAAGGGACTTAGTCCCCTGCATAGGGTGTTTAACTCTCCAAACAACCAGTACATGCAGCCTGTGGAGGGACTTTCACTCCCGGCCATAGAAGAATTCTTACACGAGTATCAAGCAGATCATCTTCATCATGCAGGGCTGGCAGGAGCATACTCATCCACCAGGCTCTCTGATATTGGAAGTTCATCAGAATGCTTTGACATCTCAACTTCAATCCCATCCATTTTGGACAGCTTGACAATGGCTACTTCTTCAAGGTATTGTGGATCGGTGAGTGAGGAATCTTCAGTGCCTGGTGGGTCTCAGCTCTCCCAAGAGAATGACATGTATCAAATGGGGTCTATTGCCACTGCATCTCTTTCACAGGCTCTGCACCAAGAACGACAGCAAGAGAAGCAGCAAAAAGAACAACAATCACACCCTCAACCACATAGCTTGATGGTGCCAATTCCTATTGGAACCGAGCAGGAGCAAGACAGTGGGCTTCAATTGGTGCACCTACTATTAGCTTGTGCTGAAGCAGTGGCCAAAGAGGAATACATGTTAGCAAGAAGGTACTTGCACCATCTGAACCGAGTAGTGACACCTCTGGGCGACTCCATGCAGCGCGTGGCTTCTTGTTTTACCGAAGCCTTAAGCGCAAGACTTGCAGCCActctcaccaccaccacctcctccaaccccaaaacaaccTTCTCCGGCGGCTTCCCCTCAAACTCCATAGAAATCCTCAAGATCTACCAAATCGTCTACCAAGCCTGCCCTTACGTCAAATTCGCCCACTTCACCGCCAACCAGGCCATCTTCGAAGCCTTCGAAGCCGAAGAGCGCGTCCACGTCATCGACCTCGACATCCTCCAAGGCTACCAATGGCCCGCTTTCATGCAAGCCCTAGCCGCCCGACCCGGCGGGGCTCCGTTCCTTCGGATCACGGGTGTCGGACCCTCCATCGACTCCGTCAGGGAAACGGGCCGATGCCTAACCGAATTGGCCCACTCTCTCAACATCCCCTTCGAATACCATCCCGTGGGCGAGCAATTGGAGGACCTCAAGCCGCACATGTTCCACCGCCGCGTCGGAGAAGCCCTCGCCGTCAACTCCGTCAACCGCCTCCACCACGTCCCCGGAAACTGCATCGGAAATTTGCTGGCGATGATAAGGGACCAAGCCCCCAACATTTTCACGCTGGTGGAGCAAGAGGCGAGCCATAACGGACCCTACTTTCTTGGAAGGTTCCTGGAGGCGCTGCATTATTACTCAGCGATTTTCGATTCCCTGGACGCGACGTTCCCGCCGGAGTCGGCGCAGAGGGCGAAGGTGGAGCAGTACATATTTGCGCCGGAGATAAGGAACATAGTGGCGTGCGAAGGGGGGGAGAGGATGGAGAGGCACGAGAGGTTGGAGAAATggaggaagataatggaaggGAAGGGGTTCAAGGGGGTCCCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATATTGTTGGGTTTGTATTCGTGTGATGGGTATAGGTTGACGGAGGACAAGGGTTGCTTGCTATTGGGGTGGCAAGATAGAGCCCTCATCGCTGCGTCTGCGTGGCGGTGCTAG 2031 0.5111 MINSLCGSSLSLKSENSCNKLQPTSSSNESGLLQCKKSGTTQSSEQLDDQTNSLTPPSLNLPAFKFDLDGDVEVQSPDSSMWESFFSDQLEADFMISSPVRNMPSPQASTYNCNYNYAQAMQGQSVSGCSPPRFSSQIGAFSSTHKGKGLSPLHRVFNSPNNQYMQPVEGLSLPAIEEFLHEYQADHLHHAGLAGAYSSTRLSDIGSSSECFDISTSIPSILDSLTMATSSRYCGSVSEESSVPGGSQLSQENDMYQMGSIATASLSQALHQERQQEKQQKEQQSHPQPHSLMVPIPIGTEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLTTTTSSNPKTTFSGGFPSNSIEILKIYQIVYQACPYVKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPSIDSVRETGRCLTELAHSLNIPFEYHPVGEQLEDLKPHMFHRRVGEALAVNSVNRLHHVPGNCIGNLLAMIRDQAPNIFTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIVACEGGERMERHERLEKWRKIMEGKGFKGVPLSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRALIAASAWRC 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1667 676 ProSiteProfiles GRAS family profile. 301 675 IPR005202 -
Sto8g1667 676 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 674 IPR005202 -
Sto8g1667 676 Pfam GRAS domain family 310 675 IPR005202 -
Sto8g1667 676 MobiDBLite consensus disorder prediction 268 293 - -
Sto8g1667 676 MobiDBLite consensus disorder prediction 12 58 - -
Sto8g1667 676 PANTHER GRAS FAMILY PROTEIN RAM1 15 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1667 Sto-Chr8 10708380 10710572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1667 304 676 GRAS Transcription Factor Family AT1G66350 45.119 8.19e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto8g1667 GRAS 5e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1667 - - jre:109001839 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1667 8 10708380 10710572 Sto8g1667 8 10708380 10710572 ECH