Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1655 ATGGAGAAGCTCCCAAGCTTTGTCGTCAATGGAGGCATCAAGCTCCCTATTGGGTACAGATTCTGTCCCACCGATGAAGAGCTTGTCATTCACTACCTTAAGAGGAAGGTCCTTTCTCACCCATTACCCGCTTCCGTCATTCCCGACTTCGACGTCTTCCGCACCCACCCATCCTCCCTCCCAGGCGTCGGTGATTCCAAAGAGAAGAGGTATTTTTTTAGCCGCAGAAATGGAACGGTAGCAAGAGAGATGTGGATGCTTGTGGTGGCCAAACATTCCCATCTCACCAAAACTCATTGGGTCATGCATGAATTGAGCCTTCAAACCCCCTCCCATCCATTGTTTCAGATGGTAGTGGCAGACTGGGCTGTGTACCGCATATTTCAGAGGAGAAAGCTGAAGAGAAAAGGGTGTAATGGGAAGCTTTCTAACAGAAAGaaagtggagagattagaggaggaGACTAAACCCAATTTCATAGATTTCACAGTGGAATATGGGAGCGACACAATTGGTCCTCCTCCACCACCTAGTTCCCCATCTTGTAGTGAAGGCAGTGATCAGATGGCTAGCTTCTAA 579 0.4663 MEKLPSFVVNGGIKLPIGYRFCPTDEELVIHYLKRKVLSHPLPASVIPDFDVFRTHPSSLPGVGDSKEKRYFFSRRNGTVAREMWMLVVAKHSHLTKTHWVMHELSLQTPSHPLFQMVVADWAVYRIFQRRKLKRKGCNGKLSNRKKVERLEEETKPNFIDFTVEYGSDTIGPPPPPSSPSCSEGSDQMASF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1655 192 Pfam No apical meristem (NAM) protein 16 77 IPR003441 GO:0003677|GO:0006355
Sto8g1655 192 Gene3D NAC domain 82 136 IPR036093 GO:0003677|GO:0006355
Sto8g1655 192 Gene3D NAC domain 24 81 IPR036093 GO:0003677|GO:0006355
Sto8g1655 192 MobiDBLite consensus disorder prediction 166 192 - -
Sto8g1655 192 SUPERFAMILY NAC domain 11 129 IPR036093 GO:0003677|GO:0006355
Sto8g1655 192 PANTHER NAC DOMAIN CONTAINING PROTEIN 84 91 186 - -
Sto8g1655 192 PANTHER NAC DOMAIN CONTAINING PROTEIN 84 1 80 - -
Sto8g1655 192 ProSiteProfiles NAC domain profile. 15 154 IPR003441 GO:0003677|GO:0006355
Sto8g1655 192 PANTHER NAC TRANSCRIPTION FACTOR 56 91 186 - -
Sto8g1655 192 PANTHER NAC TRANSCRIPTION FACTOR 56 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1655 Sto-Chr8 10638592 10639458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1655 7 162 NAC Transcription Factor Family AT5G13180 31.553 3.96e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g1655 NAM 2.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1655 - - lang:109340127 181.415