Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1630 ATGCTCGAAGGTGACTGGTATATGAACTCTGCTATCAATTTATCTCACCACGACCTCCCCACTCTCCCGAATCACCAAGAAACCACAGATATTGCCTTTTGCTCAAACCCAACTGATAATTTCCTAATACAGCCTGTGGATTCGTCCTCCTCCTGCTCACCCTCATTCACTCTTGACCCATCACACTCACAGCATTTTTTCCAACCCAAATCTTGCTTCTCTTCCCTCTTCAACGTTGCTTGCAACAACCCTTTCGACAATGGCTTCGATTTGGGCTCTGACAGTGGGTTTCTCGGTCCTTTCCAGGGAAATCATTCTTCGAATTCCCCTGTTTTGATGGGTTTCTCGGGCTTGAATGCTCAATCTCAGGTAGACACACTCGAACTGAGTTCGAACTCCGAGTTCCCAGCAACTCGCCTGATTCCAGTAGCTGACAATGCCGCCGCACTAGGTGACGGGTTTTGTCCGACGGGTTTAGAAGGTTTTGATAATTCGGGAGGTGCTCTGTTTTTTAACCGAGCTAAGGTTCTAAGACCTCTTGAAGTTTTCCCTCCACTGGGTGCAGCACCCACTCTCTTTCAGAAGCGAGCGGCTCTTCGCCAAAATTCTGGGGGTGCTAATAGATTGGGGACTTTGGAGATATCACCATCGAGATTCGGAAATTGTTCTACAAGGTTGGAGAACATGGAGCGGAAGAGGAAGAAAATCGAGGACGGCGAAATTGAGGAAGCTAGCATCGATCCGTCAGGGCTGAATTATGATTCTGATGAGCTTAATGAGAATGGTAAGGTGGAGGAGAATGCTTATAATGGGGGGAGCAATTCTAATGCAAATAGTACTGTCACAGGTGGAGACCAGAAGGGGAAGAAAAAGGGGCTACCAGCGAAAAACCTGATGGCCGAGAGACGGCGTAGGAAGAAGCTCAATGATAGACTGTACATGCTAAGGTCCGTTGTGCCCAAAATTAGCAAGATGGATAGGGCTTCGATACTTGGGGATGCAATTGACTACTTGAAGGAGCTACTGCAGCGGATTAATGATCTCCATAACGAGCTGGAGTCAACTCCACCTGGCTCAGTTCCACCGCCTTCTACAAGCTTTCACCCTTTGACACCCACTCCATCAACCCTTCCCTGCCGAGTCAAGGAAGAACTATGCCCTAGCTCCTTGCCAAGCCCAAAAAACCAAACTGCAAGGGTGGAGGTTCGAGTAAGAGAAGGGAGAGCTGTCAACATCCATATGTTTTGTGCCCGCAGACCAGGTCTTTTGCTTTCCACAATGAGGGCTTTGGATAACCTTGGATTGGACGTTCAGCAGGCTGTTATCAGCTGTTTCAATGGCTTTGCTTTAGATGTGTTCAGAGCCGAGCAATGCAGAGAAGGGCAGGATGTGGTCCCTGAGCAAATTAAAGCAGTACTGTTGGATTCAGCGGGTTTCCATGAAGAGGAGAGCCGCCGCGGAAGCCACCTTGTTCCTTCAGAGCTTGATAGCTCGCGGTCATACTTGAAACGACCACGAAGcctcttgctctttctgaaGGAACCCAATAGTGCCCCAAAAACCCTAACATTTTCATCTATTCACTGCCGATTCCTGTATTTCCACCTCCTCAACCTCTTTCTCCTCAGGACTGTGGATGAACTTGAAGTGGACAAATCCGTTATTGCAAAGCATCTAGAAGAATTGGAGCAACTTCTTAAGGGGATTGCTATGATGAAAGAGTTGACTCTACGGACTAGAGACTATTTAGTTTCATTTGGAGAGTGTATGTCCACAAGGATCTTTGCTGCTTATCTTAATAAAATTGGTGTTAAGGCTCGCCAATATGATGCATTTGAGATGGGTTTTACAACCACTGATGACTTCACAAATGCGGACATTTTGGAACCAACTTATCCAGCTGTTGCAAAGAGATTACTTGTTGATTGGGCTGCTGACCCTGCGATACCAATTGTTACAGGTTTCCTGGGAAAGGGCCGGAAATCATGTGCAGTAACAACACTCGGTAGAGGGGGTAGTGATTTGACAGCTACAGCAATTGGTAAATCACTAGGGTTGCCTGAAATCCAGGTTTGGAAAGATGTTGATGGTGTTTTAACTTGTGATCCAAATATATGTCCACAAGCAGAACCTGTCCCATACTTGACATTTGATGAGGCTGCTGAACTTGCATACTTTGGTGCTCAGGTCCTGCATCCACAGTCTATGAGACCGGCTAGAGAAGGCGATATCCCTGTTAGGGTTAAAAATTCTTATAATCCAAAAGCTCCAGGTACCCTTATCACCAAGACAAGAGATATGAGCAAGGCTGTACTAACCAGCATTGTTTTGAAACGTAATGTGACCATGTTGGATATTGTAAGCACTCGCATGCTGGGTCAGTTTGGGTTTCTTGCTAAGGAGCTTGATAATGTTGTTGAAGAACTGGAGAAAATTGCTGTGGTAGATCTCCAACAGAATAAATCTATCATTTCTCTTATTGGAAATGTCCAGAGGTCATCACTGATATTGGAGAAGGCATTTCATGTTCTCCGAACTCTTGGGGTCACTGTTCAGATGATCTCTCAGGGTGCATCTAAGGTGAACATCTCGTTGGTTGTAAACGACAATGAAGCAGAGCAGTGTGTCAGGGCTCTCCATGCAGCCTTCTTCGAGAGCCAGCTCTCTGACTCTGAATTACAGAAACAATGA 2691 0.4589 MLEGDWYMNSAINLSHHDLPTLPNHQETTDIAFCSNPTDNFLIQPVDSSSSCSPSFTLDPSHSQHFFQPKSCFSSLFNVACNNPFDNGFDLGSDSGFLGPFQGNHSSNSPVLMGFSGLNAQSQVDTLELSSNSEFPATRLIPVADNAAALGDGFCPTGLEGFDNSGGALFFNRAKVLRPLEVFPPLGAAPTLFQKRAALRQNSGGANRLGTLEISPSRFGNCSTRLENMERKRKKIEDGEIEEASIDPSGLNYDSDELNENGKVEENAYNGGSNSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSVPPPSTSFHPLTPTPSTLPCRVKEELCPSSLPSPKNQTARVEVRVREGRAVNIHMFCARRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCREGQDVVPEQIKAVLLDSAGFHEEESRRGSHLVPSELDSSRSYLKRPRSLLLFLKEPNSAPKTLTFSSIHCRFLYFHLLNLFLLRTVDELEVDKSVIAKHLEELEQLLKGIAMMKELTLRTRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFEMGFTTTDDFTNADILEPTYPAVAKRLLVDWAADPAIPIVTGFLGKGRKSCAVTTLGRGGSDLTATAIGKSLGLPEIQVWKDVDGVLTCDPNICPQAEPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKTRDMSKAVLTSIVLKRNVTMLDIVSTRMLGQFGFLAKELDNVVEELEKIAVVDLQQNKSIISLIGNVQRSSLILEKAFHVLRTLGVTVQMISQGASKVNISLVVNDNEAEQCVRALHAAFFESQLSDSELQKQ 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1630 896 MobiDBLite consensus disorder prediction 352 372 - -
Sto8g1630 896 Gene3D - 801 818 - -
Sto8g1630 896 Coils Coil 335 355 - -
Sto8g1630 896 PANTHER ASPARTOKINASE 541 800 - -
Sto8g1630 896 PANTHER ASPARTOKINASE 800 892 - -
Sto8g1630 896 SUPERFAMILY Carbamate kinase-like 547 763 IPR036393 -
Sto8g1630 896 TIGRFAM asp_kinases: aspartate kinase 556 795 IPR001341 GO:0004072|GO:0008652
Sto8g1630 896 MobiDBLite consensus disorder prediction 266 285 - -
Sto8g1630 896 CDD bHLH_AtAMS_like 295 366 - -
Sto8g1630 896 Pfam Helix-loop-helix DNA-binding domain 299 341 IPR011598 GO:0046983
Sto8g1630 896 Pfam Amino acid kinase family 571 750 IPR001048 -
Sto8g1630 896 Gene3D - 764 800 - -
Sto8g1630 896 Coils Coil 545 565 - -
Sto8g1630 896 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 295 363 IPR036638 GO:0046983
Sto8g1630 896 Gene3D - 819 884 - -
Sto8g1630 896 SMART finulus 298 347 IPR011598 GO:0046983
Sto8g1630 896 MobiDBLite consensus disorder prediction 264 303 - -
Sto8g1630 896 PANTHER ASPARTATE KINASE 800 892 - -
Sto8g1630 896 PANTHER ASPARTATE KINASE 541 800 - -
Sto8g1630 896 Gene3D - 533 763 IPR036393 -
Sto8g1630 896 MobiDBLite consensus disorder prediction 289 303 - -
Sto8g1630 896 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 292 341 IPR011598 GO:0046983
Sto8g1630 896 CDD ACT_UUR-ACR-like 412 453 - -
Sto8g1630 896 Gene3D - 286 355 IPR036638 GO:0046983
Sto8g1630 896 SUPERFAMILY ACT-like 815 886 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1630 Sto-Chr8 10469188 10485543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1630 1 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 58.672 1.46e-149 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto8g1630 AA_kinase 3.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1630 - K00928 vvi:100265294 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1630 8 10469188 10485543 Sto8g1630 8 10469188 10485543 ECH
Sto8g1630 8 10469188 10485543 Sto13g0613 13 5663584 5667018 ECH