Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1616 ATGTCAGGGACTCTTGCAGCAATAGTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGTTATAGCACTCATATGGTTCTTCCTCTCTCACAGGAGGAATGTGTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCCCAAGTGGGAAGACATGGTGGAATTGAGTTGACATTACGAGATACTAGGAGGTTTGAGATGGAAGAATTGTCTGTCGCCACAAAGAATTTCAGTGacaaaaatttgattggagAAGGGAAGTTTGGGGAGGTTTATAAGGGTTTACTTCAAGAAGGTATGCTTGTGGCCATCAAAAAACGGCGAGGACTACCTAGCCCAGAATTTGTGGATGAGGCACGCTACCTCTCATCCATTCATCATCGGAATCTTGTAACTCTTTTGGGCTACTGCCAGGAGCAAAATCTTCAGTTTCTTATATATGAGTATGTGCCTAATGGGAGCGTCTCCAGTCACTTGTATGATGGTGGCCAGCAATCGCAAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCTAGGTGCAGCTAAAGGTCTGGCTCATCTTCACTCCCTAAGCCCCCGTTTGGTTCATAAGAATTTCAAAACGGCCAATGTTCTAGTGGATGAAAACTTCATTGCTAAGGTTGCAGATGCCGGACTTCGTAATTTCCTGGGAAGAGCTGACATTGCAGGCCCATCTTCTCAAGTAGCCGCAGATGAGATATTCCTTGCTCCTGAAGTCAGAGAGTTCAGACGGTTTTCTGAGAAGAGTGATGTGTACAGTTTTGGGGTATTTTTGCTGGAAATGTTAAGTGGGAAGGAAGCAACAGCATTACCATCTCCAGACTCTAATCAGAATCTAATTGAATGGGTGCAAATTAATGAAGATCAACGCATTATGATTAAAATCATTGATCAAAGATTGGGGAGTAGTTTCACACCTGAAGGTATGGAAGAATTCATCATGTTGATAATTCGATGTTTAGATGTTTCAAGTGAGAGAAGACCTGCCATGAGCTATGTGGTAATGGAACTTGATCGGATTCTGGAGAAAGAAATGAAGTTGACAACTGTTATGGGTGAAGAAGGCACCCCAACTGTGACCCTTGGAAGTCAGTTATTCAAAGCAACAAGGTAA 1143 0.4304 MSGTLAAIVGGAAGAVALVGIVIALIWFFLSHRRNVSRTSETGSSDPSQVGRHGGIELTLRDTRRFEMEELSVATKNFSDKNLIGEGKFGEVYKGLLQEGMLVAIKKRRGLPSPEFVDEARYLSSIHHRNLVTLLGYCQEQNLQFLIYEYVPNGSVSSHLYDGGQQSQEKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRADIAGPSSQVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLEMLSGKEATALPSPDSNQNLIEWVQINEDQRIMIKIIDQRLGSSFTPEGMEEFIMLIIRCLDVSSERRPAMSYVVMELDRILEKEMKLTTVMGEEGTPTVTLGSQLFKATR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1616 380 Pfam Protein tyrosine and serine/threonine kinase 82 347 IPR001245 GO:0004672|GO:0006468
Sto8g1616 380 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 380 - -
Sto8g1616 380 Gene3D Transferase(Phosphotransferase) domain 1 151 366 - -
Sto8g1616 380 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Sto8g1616 380 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 380 - -
Sto8g1616 380 Gene3D Phosphorylase Kinase; domain 1 50 150 - -
Sto8g1616 380 SUPERFAMILY Protein kinase-like (PK-like) 59 347 IPR011009 -
Sto8g1616 380 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1616 Sto-Chr8 10386778 10389560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1616 66 361 Trihelix Transcription Factor Family AT5G38560 38.361 5.15e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Sto8g1616 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1616 - - gmx:100820178 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1616 8 10386778 10389560 Sto8g1616 8 10386778 10389560 ECH