Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1611 TTGTTGGGTGAGCAGGTGCTTCAGAATGATATTGATCTGCTAAATCCTCCAGTCGAGCTGGAGAAGAGAAAGCACAAACTCAAGCGTCTTGTTCAGTCACCAAACTCTTTCTTCATGGATGTTAAGTGCCAAGGTTGCTTCAATATaACCACTGTATTCAGCCACTCTCAGACGGTTGTGGTATGTGGTAACTGCCAGACTGTCTTATGCCAGCCAACAGGTGGGCGGGCGAGGCTAACAGAGGGTTGCTCTTTTAGGAAGAAGGGAGATTAG 273 0.4725 LLGEQVLQNDIDLLNPPVELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1611 90 ProSitePatterns Ribosomal protein S27e signature. 42 74 IPR000592 GO:0003735|GO:0005840|GO:0006412
Sto8g1611 90 PANTHER 40S RIBOSOMAL PROTEIN S27 4 89 IPR000592 GO:0003735|GO:0005840|GO:0006412
Sto8g1611 90 Pfam Ribosomal protein S27 34 88 IPR000592 GO:0003735|GO:0005840|GO:0006412
Sto8g1611 90 SUPERFAMILY Zn-binding ribosomal proteins 34 88 IPR011332 GO:0006412
Sto8g1611 90 PANTHER 40S RIBOSOMAL PROTEIN S27-RELATED 4 89 - -
Sto8g1611 90 Hamap 30S ribosomal protein S27e [rps27e]. 28 88 IPR000592 GO:0003735|GO:0005840|GO:0006412
Sto8g1611 90 Gene3D - 9 89 IPR023407 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1611 Sto-Chr8 10353085 10353608 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1611 6 90 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 94.118 4.24e-58 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1611 K02978 - minc:123230388 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1611 8 10353085 10353608 Sto8g1611 8 10353085 10353608 ECH