Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1606 ATGAGTTTTCAGGATATTCAAGGCGGGGCTAAGCGACCTGGTCTTCGCATCCAGTCGCCGTCGCAGGCGGTGGCTGCTGGGATTTTCCAGATCAATACAGCCGTCGCTACCTTCCGGAGACTCGTCGATGCCATCGGAACTGTTAAGGACACTCCCGAGCACCGTCAGAAGCTGCACAATGCGAGGCAGAAGATATTGCAGCTGGTGAAGGATACTTCTGCAAAGCTCAAGTCCTTGAGCGAATCTGATCGAGATGCTGATGCCAACCAGCCTAGTAAGCAAATTGAAGATGCTAAGCTAGCAAGAGATTTCCAAACCACATTGCAAGAGTTCCAGAGAGTACAACAGCTGGCTTCTGAGCGCGAGTCTACTTACACTCctgctcctcctccttcttctttaccCACAAGTGGCTATGGTGAAGAAGAGTGGGTTGACAAAGATCAAGAAAGCCAACCTTTTATGAGGGAACAGAAGAGGCAGGAGATACACTTATTGGATAACGAAATAGCCTTCAATGAGGCCATGATTGAAGAAAGAGAACAGGGCATTAGAGAGGTAGAGGAGCAAATTGGACAAGCCAATGAAATTTTTAAGGACCTAGCTGTTCTGGTTCATGAGCAGGGAGTGGTTATTGATGACATTCAATCAAATATTGATGCTTCTGCTGGTGCAACAACACAAGCTAAAGTTCAGCTTGCCAAGGCTTCTAAAAGTGTGAAATCTAGATCCTCATGGTGTTGGTGGGTGCTTATAATATTTGTGGTGGTGGCGGCCATCATTCTTGTTGTTCTCCTTGTTTAG 804 0.4527 MSFQDIQGGAKRPGLRIQSPSQAVAAGIFQINTAVATFRRLVDAIGTVKDTPEHRQKLHNARQKILQLVKDTSAKLKSLSESDRDADANQPSKQIEDAKLARDFQTTLQEFQRVQQLASERESTYTPAPPPSSLPTSGYGEEEWVDKDQESQPFMREQKRQEIHLLDNEIAFNEAMIEEREQGIREVEEQIGQANEIFKDLAVLVHEQGVVIDDIQSNIDASAGATTQAKVQLAKASKSVKSRSSWCWWVLIIFVVVAAIILVVLLV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1606 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 174 236 IPR000727 -
Sto8g1606 267 Pfam Syntaxin-like protein 25 125 IPR006011 GO:0016020
Sto8g1606 267 PANTHER SYNTAXIN-22-LIKE 15 266 - -
Sto8g1606 267 CDD SNARE_Qa 177 235 - -
Sto8g1606 267 Pfam SNARE domain 211 262 IPR000727 -
Sto8g1606 267 Gene3D - 167 267 - -
Sto8g1606 267 SMART tSNARE_6 169 236 IPR000727 -
Sto8g1606 267 Gene3D - 15 129 - -
Sto8g1606 267 SUPERFAMILY t-snare proteins 18 229 IPR010989 GO:0016020|GO:0016192
Sto8g1606 267 PANTHER SYNTAXIN 15 266 IPR045242 -
Sto8g1606 267 MobiDBLite consensus disorder prediction 115 142 - -
Sto8g1606 267 SMART SynN_4 10 123 IPR006011 GO:0016020
Sto8g1606 267 Coils Coil 177 197 - -
Sto8g1606 267 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1606 Sto-Chr8 10313120 10314964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1606 1 254 SNARE and Associated Proteins AT5G46860 59.690 1.27e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1606 - K08488 gsj:114389394 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1606 8 10313120 10314964 Sto8g1606 8 10313120 10314964 ECH