Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1591 ATGAACGACCTAATGACCAAATCGTTCATGAGCTACGTGGATTTGAAGAAAGCAGCGATGAAAGACGTGGATCTGGAAGCTGGTCTTCCTCCCAACGACGTAGAACTAAGCTCTTCAACCACCCACATGGACACTGACATGGGTCTGTTCCTGGAAGAGGCAGAGAAGGTGAAAACAGAGATGGCTTATCTCCAAGAATTACTCAACAAGCTTCATCAAGCCAACGAAGAGAGCAAATCCCTTCACAAGCCCGAAGCCCTAAAATCCCTTCGCACCAGAATCAATTCCGACATAGTCACTGTGCTGAAGAAGGCCCGAACCATCCGGTCCCAGCTGGAAGAAATGGACCGGGCCAATGCTGCGAATAGGAGGCTATCTGGGCTGAAAGAAGGAAGCCCAGCGATTTACAGGACGAGGATTGCGGTGACCAACGGACTCCGCATGAAGCTGAAGGAGATGATGATGGAGTTTCAGGGGCTGAGACAGAGGATGATGACAGAGTACAAAGACACAGTGGGGAGACGGTATTTTACAGTGACAGGGGAATACCCAAATGAAGAGGTGATTGAGAAGATAATCTCGAATGGAGATGAGGAGTTCTTGAGCAAGGCCATAGAAGAGCACGGAAGGGGGAAGGTTCTGGAGACTGTGGTGGAGATACAGGACAGACACGATGCTGCGAAGGAGATTGAGAAGAGCCTTCTGGAGCTTCACCAGGTGTTTCTGGATATGGCTGTGATGGTGGAGGCACAGGGTGAGAAGATGGATGATATTGAGCACCATGTGCTTCATGCTTCCCATTATGTGAAGGATGGGACTAGGGATCTTCAGACCGCGAAGAAATACCAGAAGAGCGGCAGAAAGTGGATGTGTATTGGATTGATACTTCTTCTCATTATTATTCTCGTAATTGTCATCCCCATTGTCACTAGTTTCAGCAGTTCTTGA 948 0.4852 MNDLMTKSFMSYVDLKKAAMKDVDLEAGLPPNDVELSSSTTHMDTDMGLFLEEAEKVKTEMAYLQELLNKLHQANEESKSLHKPEALKSLRTRINSDIVTVLKKARTIRSQLEEMDRANAANRRLSGLKEGSPAIYRTRIAVTNGLRMKLKEMMMEFQGLRQRMMTEYKDTVGRRYFTVTGEYPNEEVIEKIISNGDEEFLSKAIEEHGRGKVLETVVEIQDRHDAAKEIEKSLLELHQVFLDMAVMVEAQGEKMDDIEHHVLHASHYVKDGTRDLQTAKKYQKSGRKWMCIGLILLLIIILVIVIPIVTSFSSS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1591 315 Coils Coil 57 77 - -
Sto8g1591 315 ProSitePatterns Syntaxin / epimorphin family signature. 223 263 IPR006012 GO:0005484|GO:0006886|GO:0016020
Sto8g1591 315 Pfam Syntaxin 50 252 IPR006011 GO:0016020
Sto8g1591 315 Gene3D - 213 312 - -
Sto8g1591 315 SMART SynN_4 42 169 IPR006011 GO:0016020
Sto8g1591 315 CDD SNARE_syntaxin1-like 216 278 - -
Sto8g1591 315 CDD SynN 47 204 IPR006011 GO:0016020
Sto8g1591 315 Pfam SNARE domain 254 305 IPR000727 -
Sto8g1591 315 Gene3D - 47 175 - -
Sto8g1591 315 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 217 279 IPR000727 -
Sto8g1591 315 PANTHER SYNTAXIN-RELATED PROTEIN KNOLLE 4 308 - -
Sto8g1591 315 SUPERFAMILY t-snare proteins 45 272 IPR010989 GO:0016020|GO:0016192
Sto8g1591 315 SMART tSNARE_6 212 279 IPR000727 -
Sto8g1591 315 PANTHER SYNTAXIN 4 308 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1591 Sto-Chr8 10229653 10230600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1591 1 315 SNARE and Associated Proteins AT1G08560 67.296 1.36e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1591 K08486 - gmx:100816016 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1591 8 10229653 10230600 Sto8g1591 8 10229653 10230600 ECH