Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1589 ATGATTAGCGCGATAAAGGCCGCGATTGGAGATGCAGTGTTGACTTTCATGTGGGTCTTTTGTGCATCTACTCTGGGATTAGCCACTAGGACGATAGTAACATCACTAGGCCTTCAGCATCTATCCTTCAATGGTCTCAATTACCCATCAATTCTCGTCCTTATCGCCCTTGTCTTCACCCTTGTCTTCATTTTCACCATCATCGGCAATGCCTTGGGTGGCGCTAGCTTCAACCCCACTGGGACTGCTTGCTTTTACGCCGTTGGTGCCGGCAATGATACCCTTATCTCCATGGCTCTCCGCTTTCCTGCTCAGGCGCTAGGTGCTGCTGGTGGTGCTCTGGCAATTATGGAGGTGATGCCGTCAAAGTACAAGCACATGCTCGGCGGCCCTTCTTTGAAAGTTGACCTGCATACTGGAGCTATTGCTGAAGGGGTTCTGACATTTCTGATTAGTTTTGCTGTCCTTTTCATCATACTTAGGGGTCCTCGGAGCGAGTTATTGAAGACTTTGTTGTTGGCTGTATCCACCGTGGTTATGGTCACCCTTGGCGCTACTTTCACCGGACCCTCCATGAATCCTGCCAATGCTTTCGGTTGGGCATACGTAAACAACTGGCACAACACTTGGGACCAATTCTATGTTTACTGGATTTGCCCCTTCATTGGAGCAATATTGGCTGCTTGGGTGTTTCGTTTTGTGTTTCCCCCACCAGCACCCGTGGTGAAACAGAAGAAAGCCTGA 744 0.4946 MISAIKAAIGDAVLTFMWVFCASTLGLATRTIVTSLGLQHLSFNGLNYPSILVLIALVFTLVFIFTIIGNALGGASFNPTGTACFYAVGAGNDTLISMALRFPAQALGAAGGALAIMEVMPSKYKHMLGGPSLKVDLHTGAIAEGVLTFLISFAVLFIILRGPRSELLKTLLLAVSTVVMVTLGATFTGPSMNPANAFGWAYVNNWHNTWDQFYVYWICPFIGAILAAWVFRFVFPPPAPVVKQKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1589 247 Gene3D Glycerol uptake facilitator protein. 2 245 IPR023271 -
Sto8g1589 247 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1589 247 SUPERFAMILY Aquaporin-like 3 242 IPR023271 -
Sto8g1589 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1589 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1589 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1589 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1589 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1589 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1589 247 PANTHER AQUAPORIN SIP1-1 3 246 - -
Sto8g1589 247 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1589 Sto-Chr8 10219833 10223968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1589 2 247 Major Intrinsic Protein MIP AT5G18290 54.032 6.94e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1589 K09875 - gmx:100792787 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1589 8 10219833 10223968 Sto8g1589 8 10219833 10223968 ECH