Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1586 ATGTCTAAAATGATGGTAACGACAACAGCGAATGCGAGGGAATCCAACCTACCCCCAGGGTTTAGGTTCCACCCTACGGATGAAGAGCTCATCCTTCACTATTTAAAGAAGAAGGTCGCCTCTTTGCCCTTGCCTGTTTCCATCATTGCCGAGGTCGATATCTACAAGTTTGATCCTTGGGATTTACcagGCAAGGCTGCGTTTGGAGAGAAAGAATGGTACTTCTTCAGCCCCAGAGACCGCAAGTACCCAAATGGAGCGAGGCCAAACAGAGCGGCCGCTTCTGGGTATTGGAAGGCAACTGGCACTGATAAGACCATCGTGATGTCATCAGGAGGAAGAGGAGGGCAACAGATGAGTATAGGCGTGAAGAAGGCTCTGGTTTTCTACAAAGGAAGACCCCCTAAGGGTATTAAGACCAATTGGATCATGCACGAGTATCGTCTTGTCCATAACAACAAACCCATTAAGCTCAAGGACACATCCATGAGGCTAGATGACTTTGTTCTGTGCCGCATATACAAGAAGTCTAAATTTCATGTATCTTCATCAACAGAGGCATCACCACCACTAGAACAAGAACAACTTTTGAAACAAACCCATCCTCTTCCTCCTCAAACTCAAAACACACTCACATCTCACAAGTCCTTGTCCTTCTCCAATCTCTTAGACGCCATGGACTACTCTATGTTGAGCACCTTCTTATCTGATAACCACCCTCCTCCCTTTggatcctcttcttcttcttcggggTTTAATctagatcatcatcatcaattatCCTCTCAAAACAATGAAAACAGCTTCATGTTCCAGAAGCCTCCTCCGCCATTCAACCCAAACACAGAAAAGCAGGATGGCGTCACACCTCTGTACCCCTCCAACAAACACATCACCACTTCTGCTAATTCTTCTTGCAGTTTTCCAGAAACACCCAACCCCCAATACGAGAGTAATACCCCTCAGCAATGGAACTTCCTGAAGCAGTCATTGTTGAATCAGCACTTACTTCTGGGGGGTCCTCATCATCGCTTTCAGGGATAA 1044 0.4416 MSKMMVTTTANARESNLPPGFRFHPTDEELILHYLKKKVASLPLPVSIIAEVDIYKFDPWDLPGKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVMSSGGRGGQQMSIGVKKALVFYKGRPPKGIKTNWIMHEYRLVHNNKPIKLKDTSMRLDDFVLCRIYKKSKFHVSSSTEASPPLEQEQLLKQTHPLPPQTQNTLTSHKSLSFSNLLDAMDYSMLSTFLSDNHPPPFGSSSSSSGFNLDHHHQLSSQNNENSFMFQKPPPPFNPNTEKQDGVTPLYPSNKHITTSANSSCSFPETPNPQYESNTPQQWNFLKQSLLNQHLLLGGPHHRFQG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1586 347 MobiDBLite consensus disorder prediction 241 272 - -
Sto8g1586 347 MobiDBLite consensus disorder prediction 300 320 - -
Sto8g1586 347 MobiDBLite consensus disorder prediction 241 285 - -
Sto8g1586 347 Pfam No apical meristem (NAM) protein 18 149 IPR003441 GO:0003677|GO:0006355
Sto8g1586 347 SUPERFAMILY NAC domain 2 176 IPR036093 GO:0003677|GO:0006355
Sto8g1586 347 PANTHER NAC TRANSCRIPTION FACTOR 56 8 287 - -
Sto8g1586 347 Gene3D NAC domain 26 181 IPR036093 GO:0003677|GO:0006355
Sto8g1586 347 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Sto8g1586 347 PANTHER OS01G0104200 PROTEIN 8 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1586 Sto-Chr8 10196830 10198684 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1586 15 347 NAC Transcription Factor Family AT3G04070 49.280 2.73e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g1586 NAM 1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1586 - - gmx:100301906 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1586 8 10196830 10198684 Sto8g1586 8 10196830 10198684 ECH