Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1585 ATGGAAGAAGCGATAGTGGTAAACAAAGGAGAAGAAGCACTGGATTTACCTCCAGGCTTCAGATTCCATCCGACGGATGAGGAGATCATCACATGTTATCTGACGGAGAAGGTGTTGAATAGGAATTTCAGTGCAACTGCTATTGGAGAAGCTGACTTGAACAAGTGCGAGCCTTGGGATTTGCCCAAGATAGCGAAGATGGGGGAGAAAGATCAGTGGTACTTCTTCTGCCAAAGAGACAGGAAGTATCCTACAGGGATGAGAACCAATCGAGCAACGGAGAGTGGCTACTGGAAGGCCACCGGCAAAGACAAGGAAATCTACAAAGGCAAAGCCAACCTTGTGGGCATGAAGAAGACCCTCGTCTTCTATACTGGCAGAGCCCCTAAGGGCGAGAAAACCAATTGGGTTATGCACGAGTTCCGATTACAAGGCAAATTCGCTACTTACACCCTCCCTAAGCCTGCTAAGGAGGAATGGGTGGTGTGCAAGATCTTCCACAAGCCCACTACTcctcaacctcaacctcaacACATTGTGTATAAAAACACTACCCCTTCGGAGCTTCTCAGGATGGGGGACGATCTCCTGGATTGTTCCTCACTCCCTCCTCTCATGGACCCTCCCACCCATCATTTCAAGGCAGAATTAGGAGATCAAGTGTACGGCATGCACAACCCCATGATGATCCCCAATTACAACCATGTGAATTATTTCAGTACTAGTAGTAGTAGTGATCAAATTGGAAGcgagaataataattatagggAAATGGGAGGTGTAGTGAAGAATGAATACAAGGTGGTTATGTGTGGAGGAATTGGATTGATGGAAATGGATAATAATAAACAGTGCAGCAACCATTCTGGCCTCACCAACGACATAAACGCCGAAACTTCCTCCGCTGTTTCCAACACTACTACTACAAGTACTGCACACTACCTGCACCATCTCCACCCTCCATCTCTGCCTCCTCTCTCTGATTTCGAATGCCTCTGGGATGACTACTga 1011 0.453 MEEAIVVNKGEEALDLPPGFRFHPTDEEIITCYLTEKVLNRNFSATAIGEADLNKCEPWDLPKIAKMGEKDQWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYKGKANLVGMKKTLVFYTGRAPKGEKTNWVMHEFRLQGKFATYTLPKPAKEEWVVCKIFHKPTTPQPQPQHIVYKNTTPSELLRMGDDLLDCSSLPPLMDPPTHHFKAELGDQVYGMHNPMMIPNYNHVNYFSTSSSSDQIGSENNNYREMGGVVKNEYKVVMCGGIGLMEMDNNKQCSNHSGLTNDINAETSSAVSNTTTTSTAHYLHHLHPPSLPPLSDFECLWDDY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1585 336 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
Sto8g1585 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 303 - -
Sto8g1585 336 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Sto8g1585 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 7 303 - -
Sto8g1585 336 SUPERFAMILY NAC domain 12 168 IPR036093 GO:0003677|GO:0006355
Sto8g1585 336 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1585 Sto-Chr8 10183795 10185213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1585 1 310 NAC Transcription Factor Family AT5G18270 55.452 1.09e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g1585 NAM 7.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1585 - - qlo:115954240 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1585 8 10183795 10185213 Sto8g1585 8 10183795 10185213 ECH