Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1583 ATGTACTATCATCAGCAGCAAAGAGCAAAGAACATCCACTCTTCAAGGATGCCCAACCCTCCTGAGAGGCATATGCTAATCCATGGTGGGAATGGTAGTGGAGATTCAGGACTTGTCCTCTCAACTGATGCTAAGCCTAGACTAAAATGGACACCAGATCTCCATGAACGGTTTGTAGAAGCAGTCAATCACCTAGGAGGACCTGATAAAGCTACACCAAAAACAGTATTGAAACTCATGGGGATTCCTGGACTTACACTATACCACTTAAAGAGTCATCTACAGAAGTACAGACTCAGTAAAAATCTGCACGGACAGGCCAATAGTAGCAGTAGCATCAATAAAAACGAAGCTGTAGGCCGAATATCTGAAACTATTGGAATTCCTATGAAAAATCTAAGCATAGGGCTTCAGACAAACAAAAATCTAGAAATAAATGAGGCACTACATATGCAAATTGAAGTGCAAAGAAGGCTACACGAGCAGCTTGAGGTTCAGAGACACTTGCAGCTACGTATAGAGGCTCAAGGAAAGTACCTTCAGGGAGTGCTTGAAAAAGCCCAAGAGACACTAGAAAGGCAAAACATAGGCACAGCAGGAATTGAAGCAGCCAAAGTTCAACTCTCTGAATTGGCATCAAAAGTATCGAATCAATGCATAGAGTCTGCATTTTCAGAGCTGAAAGAGTTACAGGAATTATGGCCTCAGGTGACCAAAGCCACCGATTGTTCCATGGATAGCTGCCTAACCTCATCATGTGAAGGAGGATCCCAAAGAGACCACCAAGACACACATAACAAAGGCTTGAGTTTGAGAGCCTACAATAATAGAACTCCAACGTTTTCAAAAGAGGGTGGCCAACAAGAGCCTATGCTTCTCAAGTCTGATCATCTGCATGAGAAAATGGTGTGTCCACCCCCATCATCAAATTATGACGACCATGCAGAAAAAAGATCAAACTCAAGCCTCCTTTCCATGAAAGTTTTCAAGGAAGAAAGCTGGATGatgaaaagggaaagggaaaatgGGAAGGATGAGAAAATTTCTCAAGATTATAGGTTATCTAGCTTGAAAACGAAACTGGACTTAAATGCCCATGATGATGAAAACGATGCTTCTTCCCACTGCCAACAGTTTGACTTGAATGGTTTTAACTGGAATTGCTAG 1167 0.4147 MYYHQQQRAKNIHSSRMPNPPERHMLIHGGNGSGDSGLVLSTDAKPRLKWTPDLHERFVEAVNHLGGPDKATPKTVLKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSSSSINKNEAVGRISETIGIPMKNLSIGLQTNKNLEINEALHMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQGVLEKAQETLERQNIGTAGIEAAKVQLSELASKVSNQCIESAFSELKELQELWPQVTKATDCSMDSCLTSSCEGGSQRDHQDTHNKGLSLRAYNNRTPTFSKEGGQQEPMLLKSDHLHEKMVCPPPSSNYDDHAEKRSNSSLLSMKVFKEESWMMKRERENGKDEKISQDYRLSSLKTKLDLNAHDDENDASSHCQQFDLNGFNWNC 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1583 388 Gene3D - 44 102 - -
Sto8g1583 388 MobiDBLite consensus disorder prediction 252 288 - -
Sto8g1583 388 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 387 - -
Sto8g1583 388 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Sto8g1583 388 MobiDBLite consensus disorder prediction 1 21 - -
Sto8g1583 388 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Sto8g1583 388 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Sto8g1583 388 Pfam MYB-CC type transfactor, LHEQLE motif 144 190 IPR025756 -
Sto8g1583 388 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 387 IPR044848 GO:0003700
Sto8g1583 388 MobiDBLite consensus disorder prediction 268 285 - -
Sto8g1583 388 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1583 Sto-Chr8 10165685 10167457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1583 77 387 G2-like Transcription Factor Family AT3G04030 51.385 9.09e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto8g1583 Myb_DNA-binding 8.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1583 - - gmx:100786282 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1583 8 10165685 10167457 Sto8g1583 8 10165685 10167457 ECH