Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1557 ATGGAAATCCAATTCCAGCAGCcaaaccaccaccaccaccaccatcatcatcagaaATCAGGCATTCCAATCAGCAAAGGTGGAAAATTCAAAGGAAGAAACAAAGGCAGCAGTAACACCAACAAATTTGTTGGGGTGAGGCAGAGGCCTTCAGGGAGATGGGTGGCTGAGATCAAAGACACAACCCAGAAGATAAGAATGTGGCTTGGCACATTTGAGACTGCAGAGCAGGCTGCTAGAGCTTATGATGAAGCTGCTTGCCTTCTTAGAGGATCCAACACTCGAACCAACTTCATCACACATGTCTCCTTAGACTCTCCTCTTGCTTCTCGGATTCGAAATCTCCTCAACAACAAGAAATCTGAAACCAAACAACAAAAACATATGCAACATTATGTGGATGCCTCTGCCCCTAAAGCCAGCAGAATCAGTACTAGCAATACTAGTAGTACTAGTACTAGTACTAGtattagtagtagtagtagtaattCTAGCAATAATGAAAACAGTGAGAATTCTCCTTCCTGTGGGACAATTCAAGATACCCAGTTGTTTGATGATGCCTATAGACCAGACTTGAGCAGTTGCAGGGAGGAATTCGGGTCGGATTCGATGTCCTCGGGTCTTTCATGGGGCAGTTTTGGACCGGTTTTTGATCGGTTTCCTTTTGCTCAAGTTTCGGATATACCCAAGAATGAGGGAAGTGTTGTGTCTGATACAGCTGACTTGGAGCTTTCAGAATTTGAGAGGATGAAAGTTGAGAGGCAAATATCAGCTTCACTCTATGCAATTAATGGAGTGCAAGAGTATATGGAAACTGTTCAGGACTCCAATGAAGCTCTGTGGGATCTTCCACCCTTGTGTTCACTCTTGTGTTAA 879 0.413 MEIQFQQPNHHHHHHHHQKSGIPISKGGKFKGRNKGSSNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEQAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNKKSETKQQKHMQHYVDASAPKASRISTSNTSSTSTSTSISSSSSNSSNNENSENSPSCGTIQDTQLFDDAYRPDLSSCREEFGSDSMSSGLSWGSFGPVFDRFPFAQVSDIPKNEGSVVSDTADLELSEFERMKVERQISASLYAINGVQEYMETVQDSNEALWDLPPLCSLLC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1557 292 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Sto8g1557 292 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 19 279 - -
Sto8g1557 292 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 19 279 - -
Sto8g1557 292 MobiDBLite consensus disorder prediction 139 179 - -
Sto8g1557 292 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Sto8g1557 292 SUPERFAMILY DNA-binding domain 42 99 IPR016177 GO:0003677
Sto8g1557 292 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Sto8g1557 292 MobiDBLite consensus disorder prediction 121 179 - -
Sto8g1557 292 MobiDBLite consensus disorder prediction 1 44 - -
Sto8g1557 292 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Sto8g1557 292 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Sto8g1557 292 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Sto8g1557 292 CDD AP2 42 98 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1557 Sto-Chr8 10013990 10014868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1557 29 292 AP2-EREBP Transcription Factor Family AT5G19790 41.392 2.27e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto8g1557 AP2 2.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1557 8 10013990 10014868 Sto8g1557 8 10013990 10014868 ECH