Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1551 ATGGTGAGCATCACTTCCTCTTGTACCGTGACTCCAAGTGAGCCAACTCCCAAGTCTTGCATGCGCTTATCTGAGTGCGACCAATCCTGCGCTTGGACTCACTCACCCACCATCTACGTCTACCACCCACCCCCACATCTCCACTCCCAAGATGCCTTCCACACACTCAAACAATCACTCAAGAAAATCTTGGTCTATTACTACCCTCTCGCTGGTCGTTTACGCCCCATTGGAGGCGGTCGTTTTGAATTAGACTGCAACGCCAAGGGAGTCACGCTCCTCCAAGCCCACTctcccaaaacattaaaccactATGCCGATTTCAGGCCCCATAGCACCGTCATAGGAGACCTTATTCCCCACATCGATTACACCAAACCCATAGACGACATCCCTTTGATTTTTGTTCAACTCACAACCTTCTCCTGCGGCGGCCTCATCATTGGCCTTGCCAACTCCCACATCATGATAGATGGTGTAGCTGCCATCAAGTTCGTTAGCTCATGGGCCAAGCTTGCTCGAGGACAATCATTAGCTGAAGACGACATGCCGTTTCTGGATCGAACCGTCCTCAGAGGTAGCCAACCGGTTATGCCACCGCGGTTCGACCACCCAGAATACGAGTCCTATCCACTCTTAGTGGGGACGTCAGACGCTACGGAGGAGGTGAAGAAGGAGACGAGTACTGAAATACTGAAGCTGACGAAAGAACAAGTGGAGAAGCTAAGGAAAGAAGCCAGCGACGAGAGCAGGAAGTACACGAGATTCGAAGCGGTAAGTGGGCATTTGTGGAGGAGCGCGTGTAAGGCACGACAACACGAGTACGAGCAGGCAACGTTGGTTCGAGTTTCGGGTGATATCCGGAATAAAGTAAAGCCACCGCTGCCTCAAAATTATGCGGGAAATGCGGTACTTCGATCAGTGACGAGAAACGTGATAGCAGGGGATGTGATGTCAAAGCCTTTAGGGTACGCAGCGGGGAAGATTAGGGAAGCCATAGAGTTATTGAAAGATGAGGAGTTCCTGAGGGATCAGCTTGATCTGATCGCAACTGTGGAGGATGTGAATTCGTTGAGGAAGGGGTTTCATTCTGTGGGATGCACTAGTGCTCTTACTAGAGCATCCTATTTTGGGAACCCAAACTTAATCTTAGGGACATGGATGAGCATGGAAGTGTACGATGCTGATTTTGGATGGGGGAAGCCTCTCTATATGGGACCCGCAAATATAGGCGGAGAAGAGGCCATAGATGAACTGTTTGGTTGCCTCAATCAAGTTACTAGCTAG 1287 0.4957 MVSITSSCTVTPSEPTPKSCMRLSECDQSCAWTHSPTIYVYHPPPHLHSQDAFHTLKQSLKKILVYYYPLAGRLRPIGGGRFELDCNAKGVTLLQAHSPKTLNHYADFRPHSTVIGDLIPHIDYTKPIDDIPLIFVQLTTFSCGGLIIGLANSHIMIDGVAAIKFVSSWAKLARGQSLAEDDMPFLDRTVLRGSQPVMPPRFDHPEYESYPLLVGTSDATEEVKKETSTEILKLTKEQVEKLRKEASDESRKYTRFEAVSGHLWRSACKARQHEYEQATLVRVSGDIRNKVKPPLPQNYAGNAVLRSVTRNVIAGDVMSKPLGYAAGKIREAIELLKDEEFLRDQLDLIATVEDVNSLRKGFHSVGCTSALTRASYFGNPNLILGTWMSMEVYDADFGWGKPLYMGPANIGGEEAIDELFGCLNQVTS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1551 428 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 407 - -
Sto8g1551 428 Gene3D - 214 418 IPR023213 -
Sto8g1551 428 Gene3D - 1 209 IPR023213 -
Sto8g1551 428 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 407 - -
Sto8g1551 428 Coils Coil 225 252 - -
Sto8g1551 428 Pfam Transferase family 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1551 Sto-Chr8 9963588 9966716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1551 2 410 Monolignol Biosynthesis Gene Families AT5G48930 34.550 6.12e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1551 K13065 - nnu:104603237 417.927