Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1550 ATGGTGACCATCACTTCGTCTTACACTGTCACTCCAAGTGAGCCAACTCCAAAGGCTTGCATGTGGTTATCCGGCAGCGACCAGTCCTGCCCTTGGACTCACACACCCACCATCTACGTTTACCAACCACCCCCACACCAACATGATGCCTTCCACACACTCAAACACTCGCTACAAAAAATATTGGTCCACTACTACCCTTTGGCTGGTCGTTTACGCCCCATTGGAGGCGGTCGTTTTGAAGTAGACTGCAACGCCAAGGGAGTCACGCTTCTCCAGGCTGAGTctcccaaaacattaaaccactACGGAGACTTCAAGCCCGACCACACTATCACAGACCTTATTCCCCACATCGATTACACCAAACCCATAGACGACATCCCTTTGATTTTTGTTCAACTCACAACCTTCTCCTGCGGCGGCCTCATCATTGGCCTTGCCAACTCCCACATCATGATAGATGGCCTCGCCAACTCCCACACCATGATGGACGGCGTGGCTGCTATTCACTTTGTCAGCTCATGGGCCAAGCTTGCTCGTGGCGAATCATTACTTGAACAAGACATGCCGTTTCTGGACCGAACCGTCCTCAAATGTCCCGAACCGCTCAGACCGCCGCGGTTCGACCATCCGGAATACAAGGACATGCCACTTCTATTGGGTACTTCAGACGCTAAGGAGGAGCAGAAGAAGGAATCGACGGTTGAATTGCTGAAGCTGACGAAAGAGCAAGTGGAGAAGATAAGGAAGGAAGCCACGGAAAGCATGAACCTTAAGACAGCCTACACGAGATACGAAGCAAAACCTTACACAAGATTTGAAGCAGTGAGTGGTCATATATGGAGGAGCGCGTGTAAGGCACGAAAACACGAGTACAATCAGCCAACGTTGGTTCGAACTGTTGGAGATATACGGAACAGACTAAACCCGCCGTTACCTCCAAATTTCGTGGGGAATGCCATACTTCGAACTGTATCAAGAAATGTGAGAGCGGGGGAAGTGATGTCAAAGGCATTGGGGTATGCAGCGCAGAAGGTGAGGGATGCGATCGCGTTAGTGAAAGATGAGGAGTACCTGAGGGATCAGCTTTATCTCATAGAAACCGTGGAGGATGTGAGTAGGCTGAGGATGGGATTTCACTCACTGGGATGTTCCAAAACGCCGTTTTTTGGGAACCCTAACTTAGTTATAGGGACATGGACGAGCATGGGAGTGTACGATGCAGATTTTGGATGGGGGAAGCCTCTCTACATGGGACCAGGATTGTTGGGGGGAGAAGGCAAGATATTCATAATTCCCTCTGAAGATGGATCTCTTGTCATTGCTATTCGTTTGCAAACCGCACATATGCCAGATTTCAAGAAATTTCTTTATGAAGATCTgtga 1389 0.486 MVTITSSYTVTPSEPTPKACMWLSGSDQSCPWTHTPTIYVYQPPPHQHDAFHTLKHSLQKILVHYYPLAGRLRPIGGGRFEVDCNAKGVTLLQAESPKTLNHYGDFKPDHTITDLIPHIDYTKPIDDIPLIFVQLTTFSCGGLIIGLANSHIMIDGLANSHTMMDGVAAIHFVSSWAKLARGESLLEQDMPFLDRTVLKCPEPLRPPRFDHPEYKDMPLLLGTSDAKEEQKKESTVELLKLTKEQVEKIRKEATESMNLKTAYTRYEAKPYTRFEAVSGHIWRSACKARKHEYNQPTLVRTVGDIRNRLNPPLPPNFVGNAILRTVSRNVRAGEVMSKALGYAAQKVRDAIALVKDEEYLRDQLYLIETVEDVSRLRMGFHSLGCSKTPFFGNPNLVIGTWTSMGVYDADFGWGKPLYMGPGLLGGEGKIFIIPSEDGSLVIAIRLQTAHMPDFKKFLYEDL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1550 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 462 - -
Sto8g1550 462 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 462 - -
Sto8g1550 462 Gene3D - 222 461 IPR023213 -
Sto8g1550 462 Pfam Transferase family 1 456 - -
Sto8g1550 462 Gene3D - 1 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1550 Sto-Chr8 9908774 9955082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1550 2 460 Monolignol Biosynthesis Gene Families AT5G48930 36.717 7.62e-100 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1550 K13065 - nnu:104603237 451.055