Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1549 ATGGTAACCATCACATCCTCTTGTACCGTCACTCCAAGTGAACCCACCCCAAATATCTGCATGTGGTTATCTGGCTGTGACCAAACCCACCCTTGGACTCACGCACCCACCATCTACGTGTACCGCCCACCCCCAAACCTTCCCTCCCAAGACGCCTTCCAAACACTCAAACACTCGCTCCACAACATCTTGGTCCACTACTATCCTCTCGCTGGTCGTTTACGCTGGATTGGAGGAGGTCGTTTGGAAGTAGACTGCAACGCCAAGGGAGTCACGCTTCTCCAGGCTCACTCTCCCAAACCATTAAACCACTACGGAGACTTCAAACCCGACCACACCATCACAGATCTCGTTCCTCACCCTGACTACACCAAACCCATGGAGGACATTCCTCTGATAATCGCTCAGCTCACCAGCTTCTCATGCGGTGGCCTCACCATCGGCCTTGCCCTCTCCCACACCATGGTGGACGGCGTGGCTGCCATTCACTTTGTCAGCTCATGGGCCAAGCTTGCTCGTGGCGAATCATTACTTGAACAAGACATGCCGTTTCTGGACCGAACCGTCCTCAAATGTCCCGAACCGCTGAGACCGCCGCGGTTCGAGCATCCGGAATACAAGGAGATGCCACTTCTATTGGGCACTTCGGAGGCTACGGAGGAGCAGAAGAAGGAATCGACGGTTGAATTGCTGAAGCTGACGAAAGAGCAAGTGGAGAAGATAAGGAAGGAAGCCACGGAAAGCATGAACGTCAAGACAGCCTACACGAGATACGAAGCTGTGAGTGGTCATATATGGAGGAGCGCGTGTAAGGCACGAAAACACGAGTACAATCAGCCAACTTTGGTTCGAATTACGGGAGATATACGGAGCAGACTAAACCCGCCGTTGCCTCCAAATTTCGTGGGGAACGCAATACTTCGAACTGTTCCAAGAAATGTAATAGCGGGGGAAGTGATGTCAAAGGCATTAGGGTATGCAGCGCAGAAGATGAGGGATGCGATCGCCTTAGTTAAAGATGAGGAGTACCTGAGGGATCAGCTTTATCTCATAGAAACCGCGGAGGATGTGAGTCGGCTAAGGATGGGATTTCACTCGCTGGGATGCTCTAAAACGCCGTATTTTGGGAACCCTAACTTAACTATAGGGACATGGACGAGCATGGGAGTGTACGATGCAGATTTCGGATGGGGGAAGCCTCTGTACATGGGACCAGGAGTGTTGGGGGGAGAAGGCAAGATATTCATAATTCCCTCTGAAGATGGATCTCTCATCGTCGCTATTCGTTTGCAAACCGCACATATGCCAGATTTCAAGAAATTTCTTTATGAGGATCTCATTTCAACCgctttttga 1356 0.5081 MVTITSSCTVTPSEPTPNICMWLSGCDQTHPWTHAPTIYVYRPPPNLPSQDAFQTLKHSLHNILVHYYPLAGRLRWIGGGRLEVDCNAKGVTLLQAHSPKPLNHYGDFKPDHTITDLVPHPDYTKPMEDIPLIIAQLTSFSCGGLTIGLALSHTMVDGVAAIHFVSSWAKLARGESLLEQDMPFLDRTVLKCPEPLRPPRFEHPEYKEMPLLLGTSEATEEQKKESTVELLKLTKEQVEKIRKEATESMNVKTAYTRYEAVSGHIWRSACKARKHEYNQPTLVRITGDIRSRLNPPLPPNFVGNAILRTVPRNVIAGEVMSKALGYAAQKMRDAIALVKDEEYLRDQLYLIETAEDVSRLRMGFHSLGCSKTPYFGNPNLTIGTWTSMGVYDADFGWGKPLYMGPGVLGGEGKIFIIPSEDGSLIVAIRLQTAHMPDFKKFLYEDLISTAF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1549 451 Gene3D - 1 208 IPR023213 -
Sto8g1549 451 Coils Coil 216 236 - -
Sto8g1549 451 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 445 - -
Sto8g1549 451 Gene3D - 215 445 IPR023213 -
Sto8g1549 451 Pfam Transferase family 1 440 - -
Sto8g1549 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1549 Sto-Chr8 9903327 9904770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1549 2 444 Monolignol Biosynthesis Gene Families AT5G48930 38.427 5.39e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1549 K13065 - nnu:104603237 469.929