Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1513 ATGGAAGATCAAAGAGAGGGAGAAGGACAACAAGAAGAGGTACATAGGAATAGGAGCGTGAGACATGGGCCGACGACGGAGAGAAGCGGTAATAACAGTGAACCGGTGCGGTCTCGGTGGACTCCTAAGCCGGAGCAGATCCTCATCCTCGAGTCCATCTTCAACAGTGGCATGGTCAACCCTCCTAAGGAGGAGACCGTCCGTATACGCAAGCTTCTAGAGAAGTTTGGCTCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGCAAGCCGCCTCCGCCCAGCTTGACCCACCCACCACCCAGCTTCAGCCGCATCACCAGCTTGGACTTGGACTTGGAGCTGCAATTCCCTTCCAATATGACGCCAACAACTCGGCTTCTATGCCTATGAATATGATGCCTTATTCGGCTTCTTTCCCTACTCATCTCTCCGCCTCCGGGGGTTCCTCTTCTGATTCTTGTGCTAATGATAATAATATGACTGATCACAGTGTTCATCAATGGGGTGGCAACAGAAGTTCCCAGAGGACCCATGGACTTCAAAACAATGTTTGGGCAAGACGTCGTTCTAGTTCATTCCtctggaatcccacttccaaccAACGACTTTGGTTTCTTGATGCACACCTTGCAGCATGGCGAAAGCTACTTTCTCGTTCCAAAGCCAACATAAATATCTCATGA 726 0.5055 MEDQREGEGQQEEVHRNRSVRHGPTTERSGNNSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQAASAQLDPPTTQLQPHHQLGLGLGAAIPFQYDANNSASMPMNMMPYSASFPTHLSASGGSSSDSCANDNNMTDHSVHQWGGNRSSQRTHGLQNNVWARRRSSSFLWNPTSNQRLWFLDAHLAAWRKLLSRSKANINIS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1513 241 PANTHER WUSCHEL-RELATED HOMEOBOX 11 21 176 IPR044558 GO:0003700|GO:0048830
Sto8g1513 241 MobiDBLite consensus disorder prediction 92 118 - -
Sto8g1513 241 MobiDBLite consensus disorder prediction 1 23 - -
Sto8g1513 241 Gene3D - 37 105 - -
Sto8g1513 241 SMART HOX_1 35 102 IPR001356 GO:0003677
Sto8g1513 241 MobiDBLite consensus disorder prediction 24 39 - -
Sto8g1513 241 SUPERFAMILY Homeodomain-like 30 104 IPR009057 -
Sto8g1513 241 MobiDBLite consensus disorder prediction 1 41 - -
Sto8g1513 241 MobiDBLite consensus disorder prediction 160 192 - -
Sto8g1513 241 Pfam Homeodomain 37 97 IPR001356 GO:0003677
Sto8g1513 241 ProSiteProfiles 'Homeobox' domain profile. 33 98 IPR001356 GO:0003677
Sto8g1513 241 PANTHER WUSCHEL-RELATED HOMEOBOX 11 21 176 - -
Sto8g1513 241 MobiDBLite consensus disorder prediction 100 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1513 Sto-Chr8 9624304 9626190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1513 18 90 Wox Gene Family AT3G03660 76.712 6.92e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto8g1513 Homeodomain 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1513 - - adu:107494279 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1513 8 9624304 9626190 Sto8g1513 8 9624304 9626190 ECH