Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1511 ATGACTTCTCACCACTTTAACAATGCCTGTGGCGACGGTTTCAGTGGAGCAATCAATCTTTTACCCTCTCCCACTGTTCCCCAACTTCCTCTCCCCAACTCTTTTGGGGTTACTGATCTAGATTTCAACAAATCTGAGATAGACTTTCAGATTTTGAGCCCTTCGTTCCAGGCGTGTGAGAGCAAGAAGAGACGCATCCATGGAGGAAATGATCATTTTGGGGTTGAGAAACAGAGATTGTCTTTGAAACTCGGTGACGAAATAGAAGCCAAGAGAAAAAGTGGGCACACTAAGCTCTGTGCCAGAGGCCACTGGAGGCCAGCCGAAGATGCCAAACTCAAAGAGCTGGTGGCTCAGTATGGTCCTCAAAACTGGAACTTGATTGCTGAGCATCTCCAAGGAAGATcagGGAAGAGTTGCAGATTGAGGTGGTTTAATCAGCTAGATCCAAGGATTAACAGAAGGGCGTTCtcggaggaagaagaggagagGCTGCTGGGTGCTCACAAAGCGTACGGTAACAAGTGGGCTATGATTGCTAGGCTGTTTCCTGGGAGGACAGATAATGCAGTGAAGAATCACTGGCATGTGATCATGGCTAGGAAGCAGAGAGAGCATTCACATGTTTATAGAAGGAGAAAGCCCACTTCTCCCGACGCCAATATTCCAAAGGGATTAAAATTGAGTCTTACAGGCAGCAGTGAAGCAAGCATCTCAAGCACAAGAGATGAGTCTGCTTCTGCTTCCACCTGCACTAATTTCTCCCTCAATAATGTGAGCCCTTTGCAGAGTCATCTAATGCGTGGAAAAGTGATGGGATTAAGTGACGGTGGGatggtggaagggaagggtgcGGACCAATCAAATAATTCAGATTCGAAATCGGAAGTATCAGTATCGGAGTCAGTAGGGACGAACAGGTGGAATTATGGGGAAAGTGTAAACGTGGGTGAAAAGATTGACATGCCATTCATTGATTTTCTGGGAGTGGgataa 996 0.4408 MTSHHFNNACGDGFSGAINLLPSPTVPQLPLPNSFGVTDLDFNKSEIDFQILSPSFQACESKKRRIHGGNDHFGVEKQRLSLKLGDEIEAKRKSGHTKLCARGHWRPAEDAKLKELVAQYGPQNWNLIAEHLQGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLLGAHKAYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQREHSHVYRRRKPTSPDANIPKGLKLSLTGSSEASISSTRDESASASTCTNFSLNNVSPLQSHLMRGKVMGLSDGGMVEGKGADQSNNSDSKSEVSVSESVGTNRWNYGESVNVGEKIDMPFIDFLGVG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1511 331 MobiDBLite consensus disorder prediction 275 302 - -
Sto8g1511 331 Gene3D - 156 215 - -
Sto8g1511 331 PANTHER OS08G0435700 PROTEIN 76 331 - -
Sto8g1511 331 Gene3D - 102 153 - -
Sto8g1511 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 148 IPR017930 -
Sto8g1511 331 MobiDBLite consensus disorder prediction 284 302 - -
Sto8g1511 331 SMART sant 101 150 IPR001005 -
Sto8g1511 331 SMART sant 153 201 IPR001005 -
Sto8g1511 331 MobiDBLite consensus disorder prediction 227 249 - -
Sto8g1511 331 CDD SANT 105 146 IPR001005 -
Sto8g1511 331 MobiDBLite consensus disorder prediction 203 249 - -
Sto8g1511 331 Pfam Myb-like DNA-binding domain 154 197 IPR001005 -
Sto8g1511 331 Pfam Myb-like DNA-binding domain 102 148 IPR001005 -
Sto8g1511 331 SUPERFAMILY Homeodomain-like 102 195 IPR009057 -
Sto8g1511 331 ProSiteProfiles Myb-like domain profile. 102 148 IPR001005 -
Sto8g1511 331 PANTHER MYB PROTEIN-RELATED 76 331 - -
Sto8g1511 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 203 IPR017930 -
Sto8g1511 331 ProSiteProfiles Myb-like domain profile. 149 199 IPR001005 -
Sto8g1511 331 CDD SANT 156 196 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1511 Sto-Chr8 9618450 9619621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1511 92 331 MYB Transcription Factor Family AT1G69560 50.201 1.22e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g1511 Myb_DNA-bind_6 6.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1511 K09422 - qsu:111993092 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1511 8 9618450 9619621 Sto8g1511 8 9618450 9619621 ECH