Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1503 ATGGGAAGGCCTCCTTGCTGTGATAAAGTTGGCATCAAGAAGGGTCCATGGACACCTGAGGAGGACATCATTCTTGTTTCTTACATCCAAGAGCATGGTCCTGGAAATTGGAGATCAGTGCCTACTAATACTGGGTTGATGAGGTGTAGCAAAAGTTGCAGACTTAGATGGACTAACTACCTCAGGCCAGGAATAAAGAGAGGGAACTTCACTCCCCATGAAGAAGGAATGATAATTCATTTGCAAGCTCTACTGGGTAACAAATGGGCAGCCATAGCTTCATATCTTCCACAAAGAACAGATAACGACATAAAGAATTATTGGAACACCCATCTGAAGAAGAAGCTGAAGAAATTCCAAGCAGGATTGGACCCCCACCTGGCAGCAAACTCAACCACCACTAATCAGTTTGTATGGAAGAGCCTTAATGAGAAAAGTTCAGAGACAATGGGAAACCATGCCTCCTCCTACAAGCCAATTAGCGAGTCTCAATCATCCACCTATGCTTCAAGCACTGAGAACATCTCACGCCTCTTACAGGGTTGGATGAGATCCTCTCCAAAGCCACAAACCACTGATACTACTGAGCTTCAGAGCAACACCAACAACATCATGCAAAACAATAATAGTAAGATGGTGAAGTCTGCAATATCAGTGGCTGCTGCTTCAAAATTTGGGTTTTACCAAGCAAAAGATGAGCAAGAAGAGGGTGGTGGAGATATGATGTCCCATGAAGAGTTTGATTCCATCTTGTCCTATGAGAACCTAAACAATACTGCTAATTGGGACAAGTCCACTGGTGATTCCATGCCTCAAAAGAGTTGTGCTGATGATGATGACAAGGAAAGGCATAATAAGCAAGGGTGTGATCAGAACAGTAGTGATGATCCACCATTGTCGGTTCTGGAGAAATGGCTCTTGGATGAGAATGTTGGTCAAGTAGAGGAGATGATGGAATTATCCCCTATGTTCTAA 975 0.4359 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAGLDPHLAANSTTTNQFVWKSLNEKSSETMGNHASSYKPISESQSSTYASSTENISRLLQGWMRSSPKPQTTDTTELQSNTNNIMQNNNSKMVKSAISVAAASKFGFYQAKDEQEEGGGDMMSHEEFDSILSYENLNNTANWDKSTGDSMPQKSCADDDDKERHNKQGCDQNSSDDPPLSVLEKWLLDENVGQVEEMMELSPMF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1503 324 CDD SANT 69 112 IPR001005 -
Sto8g1503 324 MobiDBLite consensus disorder prediction 148 169 - -
Sto8g1503 324 CDD SANT 16 61 IPR001005 -
Sto8g1503 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Sto8g1503 324 PANTHER TRANSCRIPTION FACTOR MYB60 1 316 - -
Sto8g1503 324 Gene3D - 68 137 - -
Sto8g1503 324 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto8g1503 324 MobiDBLite consensus disorder prediction 262 300 - -
Sto8g1503 324 Gene3D - 13 66 - -
Sto8g1503 324 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sto8g1503 324 SMART sant 13 63 IPR001005 -
Sto8g1503 324 SMART sant 66 114 IPR001005 -
Sto8g1503 324 MobiDBLite consensus disorder prediction 273 290 - -
Sto8g1503 324 MobiDBLite consensus disorder prediction 184 208 - -
Sto8g1503 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sto8g1503 324 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto8g1503 324 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Sto8g1503 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 316 - -
Sto8g1503 324 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1503 Sto-Chr8 9578498 9579839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1503 1 119 MYB Transcription Factor Family AT5G62470 89.916 3.93e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g1503 Myb_DNA-binding 9.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1503 K09422 - tcc:18599767 439.113