Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1480 ATGTATCAAACAAATGTTGGGTCTCCGGTAAAAAATGCCTCACCTAATGGGGGAAGTGGGAAACAACGGCTGCGATGGACGTCAGATCTTCATGATCGTTTTGTGGATGCCATTACACAGCTTGGTGGACCAGATAGGGCAACACCAAAAGGTGTTTTGAGACTGATGGGGGTACCTGGACTTACCATTTATCACGTTAAAAGCCATCTGCAGAAGTATCGCCTGGCGAAGTACCTTCCAGAATCTCCAGTTGGTGGTAAAGATtcaaaagaagagaaaagaaattttggAGACAGCATTTCTGGCACAGATTCTTCCCCGCAATTGCAAATTGGCGATGCTCTAAAAATGCAAATGGAGGTTCAGAAACGTCTACAGGAACAGCTTGAGGTTCAAAAGCAGTTACAAATGAGAATTGAAGCCCAGGGTAAATACTTGCAGAAGATCATAGAGGAACATCAGAAACTAGGTAGCGACTTGGGAGCCTCGGAAACATTGGAATCGTCCAAAGATAAGCAAGTCCTTTCCCAGGCAGAGCCTTCTGGTAATGCCTCTTCAGGGACTTTGTCTTCACATAAAAAACAGAGAACCGATGGCTGTTCAAAGGATGACTTCACTGCTTCCCAGGTGGCAACAGAGACTGCACAGAGGACTTATTCTGTTGTTGGTCAAACGGATCAAGACCATTATAATGATAATGCTGGGTTAAGATCTGACCTTGAAAGGGAATTCAATCAAGATATGTAA 747 0.4297 MYQTNVGSPVKNASPNGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRLMGVPGLTIYHVKSHLQKYRLAKYLPESPVGGKDSKEEKRNFGDSISGTDSSPQLQIGDALKMQMEVQKRLQEQLEVQKQLQMRIEAQGKYLQKIIEEHQKLGSDLGASETLESSKDKQVLSQAEPSGNASSGTLSSHKKQRTDGCSKDDFTASQVATETAQRTYSVVGQTDQDHYNDNAGLRSDLEREFNQDM 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1480 248 MobiDBLite consensus disorder prediction 202 231 - -
Sto8g1480 248 Coils Coil 122 142 - -
Sto8g1480 248 Gene3D - 20 79 - -
Sto8g1480 248 MobiDBLite consensus disorder prediction 80 109 - -
Sto8g1480 248 MobiDBLite consensus disorder prediction 160 248 - -
Sto8g1480 248 MobiDBLite consensus disorder prediction 1 23 - -
Sto8g1480 248 Pfam MYB-CC type transfactor, LHEQLE motif 110 155 IPR025756 -
Sto8g1480 248 MobiDBLite consensus disorder prediction 84 98 - -
Sto8g1480 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 78 IPR017930 -
Sto8g1480 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 14 246 IPR044848 GO:0003700
Sto8g1480 248 MobiDBLite consensus disorder prediction 1 24 - -
Sto8g1480 248 SUPERFAMILY Homeodomain-like 20 75 IPR009057 -
Sto8g1480 248 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Sto8g1480 248 PANTHER OS05G0491500 PROTEIN 14 246 - -
Sto8g1480 248 MobiDBLite consensus disorder prediction 232 248 - -
Sto8g1480 248 MobiDBLite consensus disorder prediction 161 194 - -
Sto8g1480 248 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1480 Sto-Chr8 9435697 9437800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1480 9 169 G2-like Transcription Factor Family AT4G28610 52.761 7.53e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto8g1480 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1480 - - lja:Lj1g3v4048450.1 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1480 8 9435697 9437800 Sto8g1480 8 9435697 9437800 ECH