Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1470 ATGGGACGGGCTCGGCTGCTTGTTTCTGATTTCGTGGTGTCTTTCATGTGGGTTTGGTCAGGGGTTCTGATTAAGCAATTCTCCACATATTTGGGGTTGAATCATCAGCCCCTTCTTGAGATTGTGAAGGCCACTCTTTCCGTTATGAACATGTTCTTCTTTGCATGGTTGGGAAAATTGACCCATGGAGGCGCCTACAATCCTCTCACCATTTTGGCCGATGCCATTTCCGGGGATTTCAGCAACTTCCTCTTCTGCGTTGGTGCTAGAATTCCCACTCAGGTGATTGGATCTATTACTGGGGTTAGGTTTATAATCAATACCCTTTCTGGAGTAGGAAGTGGACCACGTTTGAACATTGACATTCATCGAGGTGCACTTACAGAAGGATTCTTAACATTTGCAATTGTTACCATCTCACTTGGGCTTGCCTCAAAACTTCATGGAAGTTTCTACAGGAAGACTTGGATTTCCAGCATTTCCAAGTTAACGCTTCATATACTTGGCTCTGATCTTACTGGCGGTTGTATGAACCCAGCCTCTGTAATGGGATGGGCTTATGCTCGAGGGGATCACATTACCAAGGAGCATATTCTTGTATACTGGCTTGCCCCTATAGAGGCAACTCTTTTGGCAGTGTGGGTATTCAAATTGCTGGTTAAGCCTGCAATAGAAGAGGAAACCAGCACAAAATCTAAGTCAGATTGA 708 0.4492 MGRARLLVSDFVVSFMWVWSGVLIKQFSTYLGLNHQPLLEIVKATLSVMNMFFFAWLGKLTHGGAYNPLTILADAISGDFSNFLFCVGARIPTQVIGSITGVRFIINTLSGVGSGPRLNIDIHRGALTEGFLTFAIVTISLGLASKLHGSFYRKTWISSISKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIEATLLAVWVFKLLVKPAIEEETSTKSKSD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1470 235 Gene3D Glycerol uptake facilitator protein. 3 233 IPR023271 -
Sto8g1470 235 SUPERFAMILY Aquaporin-like 4 229 IPR023271 -
Sto8g1470 235 Pfam Major intrinsic protein 6 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1470 235 PANTHER AQUAPORIN SIP2-1-RELATED 1 235 - -
Sto8g1470 235 PANTHER AQUAPORIN SIP2-1-RELATED 1 235 IPR044226 GO:0015267
Sto8g1470 235 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1470 235 PRINTS Major intrinsic protein family signature 86 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1470 235 PRINTS Major intrinsic protein family signature 128 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1470 235 PRINTS Major intrinsic protein family signature 159 181 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto8g1470 235 PRINTS Major intrinsic protein family signature 199 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1470 Sto-Chr8 9387857 9389912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1470 1 235 Major Intrinsic Protein MIP AT3G56950 59.494 1.58e-99 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1470 K09875 - gmx:100786138 367.466