Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1460 ATGGCATCTGATCCATGGGTGAGGCAATTTAATGAAGCATCAAAACTAGCAGAAGAAGTCAAAGGAATGATTTCTGCTAAAAGTTCGCAGCCCTCTTCTGGACCTGAAACGCCGCGTCATTTGTCAGCAGCCCGGAGAAAGATAACTATTCTAAGGACCAAAATTGAAATTCTGCAGTCTCTTATCTCCACGCTTCCCAGCCAGCAACCAATAACAGGAAAAGAGATTAATAGACGCCAAGACCAGCTGGCAAATTTAAGTTCCAAAGCCAACCAGATGGCTACTACCCTTAATATGTCTGGTCTTGCTAATAGAGATAGCTTGCTAGGCCCTGATAAAAAGTCGGAAGAAGTCATGAACAAAGCAGCTGGGTTGGACAACCAAGGCCTTGTTGGTTTTCAACGGCAAATTATTAAAGAACAAGATAGCGATCTTGAAAAACTGGAAGAGACAGTTATAAGCACCAAACACATTGCATTGGCAGTGAATGAGGAACTTACCCTACATACTAGGCTTCTGGATGATTTGGATGAGCAAGTGGATACAACAAATTCCCGCCTTCAGGGCGGGAATGTGCCATTTATAGAAACTATCTATAGCAGCATTTACTTTAGATTAAAATATAGTAGGGAAGAAGACGTACAGAAAAGAACTCTCAGAAGgaCCATCATCTCAGTTCCATCCTTTTCTCTAACTGCTGGTTTTTCTTTGTCTTAG 717 0.417 MASDPWVRQFNEASKLAEEVKGMISAKSSQPSSGPETPRHLSAARRKITILRTKIEILQSLISTLPSQQPITGKEINRRQDQLANLSSKANQMATTLNMSGLANRDSLLGPDKKSEEVMNKAAGLDNQGLVGFQRQIIKEQDSDLEKLEETVISTKHIALAVNEELTLHTRLLDDLDEQVDTTNSRLQGGNVPFIETIYSSIYFRLKYSREEDVQKRTLRRTIISVPSFSLTAGFSLS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1460 238 CDD SNARE_Qc 138 191 - -
Sto8g1460 238 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 188 - -
Sto8g1460 238 SUPERFAMILY SNARE fusion complex 126 191 - -
Sto8g1460 238 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
Sto8g1460 238 Gene3D - 137 193 - -
Sto8g1460 238 MobiDBLite consensus disorder prediction 21 42 - -
Sto8g1460 238 PANTHER SYNTAXIN 1 188 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1460 Sto-Chr8 9313578 9315119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1460 2 188 SNARE and Associated Proteins AT1G79590 58.289 2.39e-78 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1460 K08503 - pop:18106091 279.641