Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1434 ATGAGGGAGGAGGACCCCAATTGGTTCTCGCGATGGGAAGAGGAACTTCCTTCTCCAGAGGAGCTCATGCCCatctcccaaaccctaatcactcCCGATCTTGCTATGGCTTTCGATATCCGAAACCCCCATCTCAATACCCCTCAACAACTTCCTCAACCCCCTCCTCCTTCAAATCCTTTGCCCTCTCCTGGCAATCCTAGTCACCCCAACTCGGCCGATTTTGCCGATTCCGCTGAATTGGGTTCTGGAACAGGGGGCGACGAACCCGCTCGCACCCTCAAGCGTCCTCGCCTTGTTTGGACTCCCCAACTTCACAAGAGGTTTGTGGATGCTGTGGCTCACTTGGGCATCAAGAATGCTGTGCCTAAGACCATAATGCAGCTGATGAGTGTAGATGGATTGACGAGGGAAAACGTCGCTAGCCATTTGCAGAAATACCGCCTTTATCTGAAGCGCATGCAAGGGCTATCCGGCGGCGGAAGCGGAGGTAGTGGTGGCGGAGGAGGTGGTGGAGCTGGATTGGCTGCTTCCGCCGATCCCGCCACTGACCATTTGTTTGCTAGCTCACCCGTCCCTCCCCATTTCTTGCATCCAGCTCGGTCTAATTCCGATCATTTCTTGCCGTTTGTGCCCGTCCCGGCTCTGCAGCACCACCATCACCAGCAGCATATGGCGGCTGCGGCTGCCGCAGCAGCCCATCCGCAACTGCAGCCACAGTATCACAGGCAGGTGGGGCATTTTGGGTCACCGCCGAATGGGCATTTTGAGCATCCATTTCTGGCTAGGCAATCTCAGCCGCTTCATAGGATCGGAGCACCAATGCACAATCCAGTAACTGCTGGTTATGTGGAGGACATGGAATCGGCTAATGCCGCAGGAGGGAGAAAGGTTCTTACTTTATTTCCAACTGGGGATGATTGA 924 0.539 MREEDPNWFSRWEEELPSPEELMPISQTLITPDLAMAFDIRNPHLNTPQQLPQPPPPSNPLPSPGNPSHPNSADFADSAELGSGTGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGSGGSGGGGGGGAGLAASADPATDHLFASSPVPPHFLHPARSNSDHFLPFVPVPALQHHHHQQHMAAAAAAAAHPQLQPQYHRQVGHFGSPPNGHFEHPFLARQSQPLHRIGAPMHNPVTAGYVEDMESANAAGGRKVLTLFPTGDD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1434 307 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 307 - -
Sto8g1434 307 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 307 IPR044841 GO:0003700|GO:0006355
Sto8g1434 307 MobiDBLite consensus disorder prediction 36 95 - -
Sto8g1434 307 SUPERFAMILY Homeodomain-like 93 153 IPR009057 -
Sto8g1434 307 Gene3D - 93 155 - -
Sto8g1434 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Sto8g1434 307 MobiDBLite consensus disorder prediction 1 22 - -
Sto8g1434 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 152 IPR017930 -
Sto8g1434 307 MobiDBLite consensus disorder prediction 1 18 - -
Sto8g1434 307 MobiDBLite consensus disorder prediction 48 67 - -
Sto8g1434 307 Pfam Myb-like DNA-binding domain 100 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1434 Sto-Chr8 9164245 9165168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1434 1 307 G2-like Transcription Factor Family AT3G10760 58.840 5.54e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto8g1434 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1434 - - jre:108983410 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1434 8 9164245 9165168 Sto8g1434 8 9164245 9165168 ECH