Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1433 ATGGATGGAATTAGTAGAACCGAAGGACTACTTGTTATTGCTGCCACCAACAGGCCTGACAATATTGAGCCAGCATTGAGGCGGCCTGGAAGACTTGACAAGGAAATTGAAATTGGTGTACCATCACCCAACCAACGATTGGATATGTTGCTGACTCTTCTCAGCGAAGTGGATCACACACTTTCAGAGTTACAAATTGACCACCTGGCCACAGTCACACATGGGTTTGTGGGTGCTGATCTAGCCGCTCTTTGTAATGAGGCAGCCTTGCTTTGTCTCAGACGTTATGCTTATTTTAAGAAGGCTTGTTATGATTACTGCTATGATGGAACATCCACTCCGTGCCATGTGTCTTCACTTGTCTCAGATATATCAGTGGCCTCTAATTTTGAACAACCTATGATGGGAGAAACTTCTGACAATATGGAAATAATTTCTGATAGTGGTGAAGAAGAGCAGATTTTGAAAGTAACTTATGAAGATTTTCAGAAGGCAAGAATGAAAATAAGACCCAGTGCCATGAGAGAGGTAATTCTGGAGGTTCCAAAGGTTAAGTGGGAAGATGTTGGTGGTCAGAAGGAGGTCAAAGCCCAATTGATGGAAGCAGTAGAATGGCCCCAGAAGCACCATGATGCATTCAAGCGTATTGGGACTCAACCTCCGAAAGGAGTGTTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGGGCAGTTGCTTCTGAAGCAGGGCTGAATTTTCTGGCTGTCAAGGGTCCAGAGCTCTTCAGCAAATGGGTTGGGGAATCTGAGAAGGCTGTCAAAGTTTTGTTTGCAAAAGCTAGGGCCAATGCCCCATCTATTGTATTTTTTGATGAAATAGATGGCCTTGCTGTCACACGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGAGTTATGAGTcaacttcttgttgaattggaCGGTTTGCATCAGAGAGTTAATGTCACTGTCATTGCTGCTACAAATAGACCAGACAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGATCGTCTGCTGTATGTGGGACCTCCTAATGAGAGAGACAGAGAAGAGATATTCCGCATACATTTGCATAAAATTCCATGTGGTTCTGATGTTAGCATAAAAGAACTGGCTTCTCTTACATATGGATGTACTGGGGCTGACATATCACTAATATGTCGTGAGGCAGCTGTTGCAGCAATTGAGGAGAGCCTTAATGCTTCACTAATAACAATGAAGCATTTGAAGACGGCAATTAAGCAGGTCCAGCCAACAGAGATTCAGTCTTACCAACAGTTGTCAGCTAAATTTCAAAGGGCTGTTCACTCCTGTAATACCAAACATGAATCCAGTCATATTCAGTGTTCTAGCCAATCTACTTCGTTCTCCATTTggtaa 1419 0.4299 MDGISRTEGLLVIAATNRPDNIEPALRRPGRLDKEIEIGVPSPNQRLDMLLTLLSEVDHTLSELQIDHLATVTHGFVGADLAALCNEAALLCLRRYAYFKKACYDYCYDGTSTPCHVSSLVSDISVASNFEQPMMGETSDNMEIISDSGEEEQILKVTYEDFQKARMKIRPSAMREVILEVPKVKWEDVGGQKEVKAQLMEAVEWPQKHHDAFKRIGTQPPKGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVKVLFAKARANAPSIVFFDEIDGLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNERDREEIFRIHLHKIPCGSDVSIKELASLTYGCTGADISLICREAAVAAIEESLNASLITMKHLKTAIKQVQPTEIQSYQQLSAKFQRAVHSCNTKHESSHIQCSSQSTSFSIW 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1433 472 Gene3D - 357 449 - -
Sto8g1433 472 CDD AAA 190 356 - -
Sto8g1433 472 CDD AAA 1 39 - -
Sto8g1433 472 PANTHER - 1 454 - -
Sto8g1433 472 Gene3D - 1 41 IPR027417 -
Sto8g1433 472 Gene3D - 42 171 - -
Sto8g1433 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 432 IPR027417 -
Sto8g1433 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 95 IPR027417 -
Sto8g1433 472 Pfam AAA+ lid domain 65 95 IPR041569 -
Sto8g1433 472 Pfam AAA+ lid domain 378 423 IPR041569 -
Sto8g1433 472 SMART AAA_5 220 358 IPR003593 -
Sto8g1433 472 Gene3D - 181 452 IPR027417 -
Sto8g1433 472 Pfam ATPase family associated with various cellular activities (AAA) 224 355 IPR003959 GO:0005524|GO:0016887
Sto8g1433 472 Pfam ATPase family associated with various cellular activities (AAA) 1 39 IPR003959 GO:0005524|GO:0016887
Sto8g1433 472 PANTHER AAA-FAMILY ATPASE 1 454 - -
Sto8g1433 472 ProSitePatterns AAA-protein family signature. 326 344 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1433 Sto-Chr8 9158416 9161756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1433 1 456 Calmodulin-binding Proteins AT3G56690 65.644 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1433 - - gmx:100788600 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1433 8 9158416 9161756 Sto8g1433 8 9158416 9161756 ECH