Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1427 ATGAAGACCAGGTCACTAGATAACTGGAGGAGTTACTTTCGGAGTGCCAATTCGGATATATTCGATATTATCGACCATGCCATCATGGTGGCGGCTTCTGATTGTCCCAAGGAGTTCCGATTGCGAAGAGATGGAATCGCACAGCGACTGTTTTCGACCAGAGTGACTCGTTGCGTGGGGTGTGACCGACTGGAGTTGGCGGTTTCCGCCGACGATGAGGAGGAAGAGGGAGGTTGTAAGAGCGATTTTGATAGAGATGGTGGTGAAGTGGAAGCCGGTGCCAGTAAAGAGAGCAAGGTCCATAGTAGCAGAGACGATCATGGAGAGATGAACACCAACCACATCAGCAATTTTAGCTATGGAGAAGCGGAAGCATTGACTGATGAGATTGAAGAAGAGTCCCAATTTTTTGCGGAGGTTCTGAGAATTAAAGAGATTCTTCGTAACAGCGAAGAAGAGTCTGATTCAGTGTTATTTGACTCTTTGAGGAGGCTCCAGCTGATGGAACTGACTGTGGATCTTCTGAAGGCAACTGAGATTGGAAAGGTTGTCAATCCTTTACGAAAGCATGTATCAAAGGATATTCGTCTTCTTGCAAGGACTCTTATTGATGGCTGGAAAGATTTGGTAGATGAGTGGGTTAATGCTACAACTACTACTACTGCAGttgtaggTTCAGAAGGTACACCAGACTCGGTAAATCCATCTGTTGTTGATgaacaagaggaagaggaagggctTCCCTCACCTCCCATGGATGAAGTGGCTTTCTTTGCAGCACAAACTACTTCAATGGAACTATCACAGTTCTTTGATggcatggatgatgatggaaATCCTAGACATGGTGGGGAATTCGTCAATAATCGTGATAATGGCCGTAAACCATCCCTGGACAGTCAAAACGACAGCAAGAGTCAGCAACCAAAGAACAATGAGGCTATTGTGAAGCTAAATAAATCAGTAACTGCTAGTTCTGGTCCTGGCAGACCATTAAAATCAAGCATGCAGCAAAGAGGGAACATGGAGCCAAGTATGCAGCACAAATTAGAGAAGTGTAGTATCCTAAGGAGGCCCCTTGTTAGCCAGAAAGATAAATTAAAGAGTTCAGATGATGCTTCAGTTCAAATGAAGCTAGAAGCCACCAAGCGGAGACTTCAGGAGAGTTATCAACAAGCCGAAAAAGCTAAGAAGCAGCGTACGATACAGGTTATGGAGTTGCATGATCTCCCCAAGCAAGGGACTGGCCACCGAAATCCTCATTTCAAACCCATGAAGAATCAAAATAGGAACTGGGCTCAGGGACGAAGGTAG 1314 0.4353 MKTRSLDNWRSYFRSANSDIFDIIDHAIMVAASDCPKEFRLRRDGIAQRLFSTRVTRCVGCDRLELAVSADDEEEEGGCKSDFDRDGGEVEAGASKESKVHSSRDDHGEMNTNHISNFSYGEAEALTDEIEEESQFFAEVLRIKEILRNSEEESDSVLFDSLRRLQLMELTVDLLKATEIGKVVNPLRKHVSKDIRLLARTLIDGWKDLVDEWVNATTTTTAVVGSEGTPDSVNPSVVDEQEEEEGLPSPPMDEVAFFAAQTTSMELSQFFDGMDDDGNPRHGGEFVNNRDNGRKPSLDSQNDSKSQQPKNNEAIVKLNKSVTASSGPGRPLKSSMQQRGNMEPSMQHKLEKCSILRRPLVSQKDKLKSSDDASVQMKLEATKRRLQESYQQAEKAKKQRTIQVMELHDLPKQGTGHRNPHFKPMKNQNRNWAQGRR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1427 437 MobiDBLite consensus disorder prediction 80 111 - -
Sto8g1427 437 MobiDBLite consensus disorder prediction 270 348 - -
Sto8g1427 437 MobiDBLite consensus disorder prediction 275 289 - -
Sto8g1427 437 MobiDBLite consensus disorder prediction 409 437 - -
Sto8g1427 437 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 129 223 IPR035441 -
Sto8g1427 437 ProSiteProfiles TFIIS N-terminal domain profile. 138 213 IPR017923 -
Sto8g1427 437 MobiDBLite consensus disorder prediction 75 114 - -
Sto8g1427 437 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 138 218 IPR035441 -
Sto8g1427 437 MobiDBLite consensus disorder prediction 223 251 - -
Sto8g1427 437 Coils Coil 376 403 - -
Sto8g1427 437 CDD TFIIS_I 138 211 - -
Sto8g1427 437 MobiDBLite consensus disorder prediction 293 344 - -
Sto8g1427 437 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 1 436 IPR044805 -
Sto8g1427 437 Pfam TFIIS helical bundle-like domain 162 210 IPR017923 -
Sto8g1427 437 SMART TFS2_5 137 212 IPR003617 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1427 Sto-Chr8 9116519 9119029 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Sto8g1427 Med26 5.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1427 - - gmx:100775579 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1427 8 9116519 9119029 Sto8g1427 8 9116519 9119029 ECH