Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1420 ATGCAGCAAGAAGGAGAGGAGATGGAGAAGTCAGAAGTGTACCAATTCCTGGCGGGTAACGCCTCCTTCTTCAGCCCTGCACCGTACGGGCTGCCTCCTGCAGCGCACAGCTTCTGCAGTTCCTCTTATTACCCCATGGATTCCTCCGATACGCCACACCAAGATAGAGCCCTCGCCGCCTTGAACAATCACAAGGAGGCCGAGAAGCGCAGGAGGGAGAGGATCAATTCCCATCTCGATAAGCTTCGCACTCTTCTTCCTTGTAATTCTAAGACAGACAAGGCGTCCCTTCTGGCAAAAGTGGTGCAGCGAGTGAGAGAGCTGAAGCAGCAAACTTCAGAAATCACGGAACTGGAAACGGTTCCTTCAGAAACGGACGAGATCACGGTGCTGTCGACAACGAGCGGCGGCGGCGACGGCAGACTGATATTCAAAGCGTCGCTGTGCTGCGAAGATCGCTCCGACCTCATACCGGACCTCATCGAGATCCTAAAGTCGCTCCATCTCAAAACCCTGAAAGCAGAAATGGCAACACTGGGAGGAAGAACCCGAAACGTCCTCATCGTAGCCGCCGATAAAGACCACAGCATCGAATCCATCCACTTCCTCCAAAACGCACTCAAATCCTTGCTTGAACGCTCCACTTCCAACGACAGATCAAAACGCCGTCGCGTATTGGACCGTAAATTATATTGA 696 0.5287 MQQEGEEMEKSEVYQFLAGNASFFSPAPYGLPPAAHSFCSSSYYPMDSSDTPHQDRALAALNNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVRELKQQTSEITELETVPSETDEITVLSTTSGGGDGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLIVAADKDHSIESIHFLQNALKSLLERSTSNDRSKRRRVLDRKLY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1420 231 PANTHER TRANSCRIPTION FACTOR BHLH30 9 230 IPR045847 GO:0003700|GO:0006355
Sto8g1420 231 CDD ACT_UUR-ACR-like 147 211 - -
Sto8g1420 231 Gene3D - 54 120 IPR036638 GO:0046983
Sto8g1420 231 CDD bHLH_AtAIG1_like 54 130 - -
Sto8g1420 231 Pfam Helix-loop-helix DNA-binding domain 63 108 IPR011598 GO:0046983
Sto8g1420 231 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 120 IPR036638 GO:0046983
Sto8g1420 231 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 108 IPR011598 GO:0046983
Sto8g1420 231 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 9 230 - -
Sto8g1420 231 SMART finulus 65 114 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1420 Sto-Chr8 9057954 9059208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1420 13 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 63.761 6.49e-81 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto8g1420 HLH 1.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1420 - K22484 qsu:111998080 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1420 8 9057954 9059208 Sto8g1420 8 9057954 9059208 ECH