Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1419 ATGGGACTCTGTCATGGAAAACCTATTGAAATCTCTCAAACCCAAGGAGAAAAACCAGTATTCCCTACTGACAAAGACGCTCTTCCAACTTCCCAGACCCCCAAATCCTCCAACTTCCCCTTTTACAGTCCAAGTCCCTTGCCGAGTCTCTTCAAGAACTCACCTGCAAATTCCAGCGTGAGCTCAACCCCTTTGCGCATCTTCAAGCGCCCATTTCCTCCTCCCTCGCCGGCCAAGCACATTCGCGCATTGCTCGCTCGCCGACATGGCTCCGTCAAGCCTAACGAGGCCTCAATCCCTGAAGGAGCTGAATGCGAGGTCGGGTTGGATAAGAATTTCGGGTTTTCCAAGCAGTTCGTAGCTCATTTCGAGATTGAAGAAGAGGTGGGTCGAGGGCATTTCGGGTATACTTGCTCCGCCAAGGGGAAGAAAGGCAGCTTGAAGGGTCAAGATGTGGCCGTCAAAGTCATTCCAAAAGCCAAGATGACAACAGCAATTGCTATAGAGGATGTACGGAGAGAAGTGAAGATATTGCGGGTTCTTACAGGACATAAGAACATGGTGCAATTCTATGAAGCCTATGAGGATGACGAAAATGTTTTTATAGTTATGGAGTTTTGCAAAGGAGGTGAACTGCTAGATAGGATTCTTTCCAGGGGTGGAAAGTACTCGGAAGAGGATGCCAAGGTTGTTATGATTCAGATATTAAGTGTTGTAGCCTTCTGTCATCTTCAGGGGGTGGTTCATCGTGATCTCAAGCCAGAGaattttctttttacttctaAGGACGAAAACTCCACACTCAAGGTCATTGATTTTGGACTGTCTGACTATGTGAAGCCAGatgAGAGGTTGAATGATATTGTGGGAAGTGCATATTATGTAGCTCCAGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGACATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTTTGGGCCCGGACAGAATCTGGTATATTTCGAGCTGTCTTGAAGACAGATCCAAGTTTTGATGATGCTCCTTGGCCTTCTTTATCAGCTGATGCAATAGACTTTGTAAAAAGGCTTTTGAATAAGGATTATCGTAAAAGACTAACTGCAGCTCAGGCTCTCTGTCATCCATGGCTGGCTAGTCATCAGGTGGATTTGAAGATACCTTTGGATATGATAATCCTCAAGCTCGTCAGAGCTTACACATGCTCGTCTTCTTTACGCAAATCAGCTTTAGGGGCTCTTGCAAAGACATTAACAGTAGCTCAGCTAACTTATCTCAGAGAACAATTTACTATGTTAGGGCCTAACAAAAGCGGATTTATCTCCATGCAGAACTTCAAGACTGCTGTTTTAAGGAGCTTCACTGATGCCTCAAAGGATTCCCGGGTCTTGGATTACGTTAACATGGTTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTGCACCAACTAGAGGGAATGGAGAGCTGGGAGCAGCATGCTAGGCGTGCCTATGAGCTGTTTGAAAAGGATGGAAATCGACCAATTATGATTGAAGAACTTGCATCGGAACTTGGGCTTAGCCCTTCAGTACCTGTTCATGTGGTACTCCAAGATTGGATAAGACACTCAGATGGGAAGCTTAGTTTCTTAGGGTTTGTCAGACTTCTGCATGGGGCTTCTTCCCGCACATTTCACAAGGCTTGA 1734 0.4469 MGLCHGKPIEISQTQGEKPVFPTDKDALPTSQTPKSSNFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGAECEVGLDKNFGFSKQFVAHFEIEEEVGRGHFGYTCSAKGKKGSLKGQDVAVKVIPKAKMTTAIAIEDVRREVKILRVLTGHKNMVQFYEAYEDDENVFIVMEFCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKVIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKTDPSFDDAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALCHPWLASHQVDLKIPLDMIILKLVRAYTCSSSLRKSALGALAKTLTVAQLTYLREQFTMLGPNKSGFISMQNFKTAVLRSFTDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGASSRTFHKA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1419 577 SMART serkin_6 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1419 577 CDD STKc_CAMK 122 384 - -
Sto8g1419 577 Gene3D Transferase(Phosphotransferase) domain 1 213 402 - -
Sto8g1419 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Sto8g1419 577 Pfam Protein kinase domain 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1419 577 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Sto8g1419 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 572 - -
Sto8g1419 577 Gene3D - 405 568 - -
Sto8g1419 577 PANTHER CDPK-RELATED KINASE 1 26 572 - -
Sto8g1419 577 MobiDBLite consensus disorder prediction 26 41 - -
Sto8g1419 577 Gene3D Phosphorylase Kinase; domain 1 116 212 - -
Sto8g1419 577 MobiDBLite consensus disorder prediction 1 41 - -
Sto8g1419 577 SUPERFAMILY Protein kinase-like (PK-like) 117 417 IPR011009 -
Sto8g1419 577 ProSiteProfiles Protein kinase domain profile. 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1419 577 SUPERFAMILY EF-hand 415 567 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1419 Sto-Chr8 9037222 9040770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1419 1 573 EF-hand Containing Proteins AT3G50530 66.455 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto8g1419 Pkinase 5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1419 - - jre:108986071 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1419 8 9037222 9040770 Sto8g1419 8 9037222 9040770 ECH