Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1416 ATGCCTTACCTTGTCcgagagaaattatttattggtGATATTAGTGATGCAGCGGAGATCCTCCAAAATGGTAGCTCTGAAATCACACATATTTTATCGGTTCTTAGCTCTGCTTCTATATCATTCTTTTCGGAATGGCGTACTACCCTAACCATCCCTGCCAAGGAAATTAAGAAGGTTTATGTTGATGCCTGTCACGCTGCTGGGAGTCCCTTGCCACCCAACAACCTTTTGTACTCGTTGGAATATGCAGGTAAAGATTTGAAGTTGGTGAGGATGGCTGTTCCTATGAGGGATACAGAAAATGAAGATTTGTTGGATTATTTGGATGTCTGCCTAAATTTTATTGATCGTAGCAGAAAAGATGGTTCTGTTATGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCATATCTGATGAGAACTGAACATCTATCTCAAGAAGACGCCCTTCAATCATTAAGGAATAGTTGTGAATTTGTTTGCCCCAATGATGGTTTTCTAGAGCAGTTAAAAATGTTTGAGGAGATGGGCTTCAAGGTAGATCGGTCTAGCTCTATTTACAAGCGATTTCGTATGCGAGTACTCGGTGAGAGTTATAACTCTGGGGTGAGAATGGACGTTTCTAAACTTGGACCTGATCCTGGCTTGCCTGTGGAAGTTGCTTCTGAGGTTGAAGGAGCTCCAAGAGTGGGAAATAATCGTAGTCCTACATATCGCTGTAAGAAGTGCCGACGGGTGGTTGCATTGAAGGAGCATGTTGTAGATCATGTTCCAGGCGAGGGCGAGACATGTGGGGAGTGGCAGAAGTGGAGAAATGACAGCCTTTTTAACAAGTGTAATGAATCTGATTGTTCATCCATATTTATTGAGCCACTACGATGGATGAAAGCAGTTGAGGAGGGTGCATCAGAGGGAAAGTTGTGCTGTATCCATTGTGACGCTCGATTGGGAAACTTCAATTGGTTTGGCATACAATGCAGCTGTGGAAGTTGGATAACCCCTGCCTTTCAGATCCACAAGTGCCGAGTGGATATAAGTCCCGTCTAA 1065 0.4291 MPYLVREKLFIGDISDAAEILQNGSSEITHILSVLSSASISFFSEWRTTLTIPAKEIKKVYVDACHAAGSPLPPNNLLYSLEYAGKDLKLVRMAVPMRDTENEDLLDYLDVCLNFIDRSRKDGSVMVHCFAGVSRSAAIITAYLMRTEHLSQEDALQSLRNSCEFVCPNDGFLEQLKMFEEMGFKVDRSSSIYKRFRMRVLGESYNSGVRMDVSKLGPDPGLPVEVASEVEGAPRVGNNRSPTYRCKKCRRVVALKEHVVDHVPGEGETCGEWQKWRNDSLFNKCNESDCSSIFIEPLRWMKAVEEGASEGKLCCIHCDARLGNFNWFGIQCSCGSWITPAFQIHKCRVDISPV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1416 354 CDD DSP_DUSP12 4 187 - -
Sto8g1416 354 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 350 - -
Sto8g1416 354 SMART dsp_5 1 182 IPR020422 GO:0006470|GO:0008138
Sto8g1416 354 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 185 IPR029021 -
Sto8g1416 354 ProSitePatterns Tyrosine specific protein phosphatases active site. 127 137 IPR016130 GO:0016311|GO:0016791
Sto8g1416 354 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 106 161 IPR000387 GO:0016311|GO:0016791
Sto8g1416 354 PIRSF DUSP12 3 53 IPR016278 GO:0006470|GO:0008138
Sto8g1416 354 PIRSF DUSP12 80 354 IPR016278 GO:0006470|GO:0008138
Sto8g1416 354 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 185 IPR020422 GO:0006470|GO:0008138
Sto8g1416 354 Pfam Dual specificity phosphatase, catalytic domain 89 181 IPR000340 GO:0008138|GO:0016311
Sto8g1416 354 Gene3D Protein tyrosine phosphatase superfamily 4 202 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1416 Sto-Chr8 9025577 9028171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1416 5 181 Protein tyrosine phosphatase (PTP) family AT3G06110 28.090 4.95e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1416 K14819 - mnt:21397824 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1416 8 9025577 9028171 Sto8g1416 8 9025577 9028171 ECH