Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1386 ATGGGAATGGCCGCAGAGTCACAGTTTCATGTATTGGCCGTCGATGACAGCCTCATAGATAGGAAGCTGATTGAGAGGCTCCTCAAGACCTCGTCGTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTGGAATTTCTGGGCTTGCGAGAGAATAATGATCAGAGCAACCCAAATACGCCCTCTGTTTCTCCTAACAGTAATCAGGAAGTGGATGTGAACCTTGTTATTACAGACTACTGTATGCCTGGTATGACTGGCTATGATTTactcaagaaaatcaagGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTAGCAGATGCTTGGAAGAAGGAGCAGAGGAATTTTTCTTGAAACCAGTGAGGCTATCAGATTTGAATAGGCTTAGACCCCATATGATGAAAACCCAGAAATTGAAGGATCAAACGCAAGAAAGAGATGAAAATCTTGAAACCCCAGAAATTCAACAATCACAGCAATCAGTAGtagaacaacaacaacatcaTCAACAATCACTACAGCAAGCCAACAATAACAAGAGGAAGGCCATGGAAGAAGGGCTTTCGCTTGAAACTGACAGAACAAGGCCAAGATACAATGGAATAGCCACTATGGTCTGA 660 0.4045 MGMAAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRENNDQSNPNTPSVSPNSNQEVDVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNRLRPHMMKTQKLKDQTQERDENLETPEIQQSQQSVVEQQQHHQQSLQQANNNKRKAMEEGLSLETDRTRPRYNGIATMV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1386 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 215 IPR045279 GO:0009736
Sto8g1386 219 SMART REC_2 9 143 IPR001789 GO:0000160
Sto8g1386 219 SUPERFAMILY CheY-like 8 165 IPR011006 -
Sto8g1386 219 Coils Coil 179 206 - -
Sto8g1386 219 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
Sto8g1386 219 Gene3D - 10 213 - -
Sto8g1386 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 215 - -
Sto8g1386 219 MobiDBLite consensus disorder prediction 146 219 - -
Sto8g1386 219 CDD REC_typeA_ARR 11 142 - -
Sto8g1386 219 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
Sto8g1386 219 MobiDBLite consensus disorder prediction 146 165 - -
Sto8g1386 219 MobiDBLite consensus disorder prediction 166 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1386 Sto-Chr8 8868544 8869857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1386 1 219 Response Regulator Gene Family AT3G57040 64.854 2.24e-102 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto8g1386 Response_reg 1.4e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1386 K14492 - jre:109011597 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1386 8 8868544 8869857 Sto8g1386 8 8868544 8869857 ECH