Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1351 ATGGCGCCAAGAACCAAACCTTCGTCTCCAATCCCTATCGGTAACTGCGAGATTACTGTTGAGGCAAAAAATTTCACCAGTAAATCGGATGCAAACAGCCTCTACATTTCTCTTCCTAGAAGCGGGAAGATTAAAGTATCAGTTGTAAAGGATGTAGCTACGAATAATATAAATGAATCTGACAATTTTAAGACCGACGATAGAGTTTATATAGCGAATGACTTCGTGCTTGTTAATCCTAAAGACGCTGATGGTATTAGCAAATCCTACCTGCAGGAAGTATTGCAGATTTATATGACAGAATTACCTGGGATGAATTATGCTGCAAATACTGGAAAGAAATCAAACTTTCTTGAAAGATGTGTAAATAATGGGAAATATCGCACACTGCTTCTGAAATCTGGTTCTGTCGGAAATTCTGGGAAGGTTATAGCTGCAATTACATATCAAATAGTCCCAGCAGACACAGAGTATGCAGAGATCCCACTTGCAGCTGTTAGTGCAATCTATCAACGGAAGGGTCTTGGTCAGTTATTGTTTCTAGAGCTACGTAAGAGGCTTCAAAATGTTGGTATTCGTTCAATTTTGTGTTGGGGAGACAAAGAATCTGAAGGGTTTTGGCTTAAACAGGGTTTTATATCAATAGCTGAGGTGGACTCTAAAGGTAGAGCCCGCAGGTTGCCTATAAAAGCTGATATACGTAAAGCATTATGCTTTCCTGGTGGTTCAACTCTCATGGTTTGCCATCTAAGGATGGAATTCTCAACTGATGCTGCTAACTCTATAAAGTGTCTTCCCTCACAGCTTCATCAGAATTCCTTGAAATCTGCTGATGCTGAAAATGATCAGCATAAATTTACAGGACAGTTACACATGGATTTGAACATTTCAAATAAATCTACCTGTAGAACAGATAATGCAGAGAATGGTCATCTGGATGCTTTGGTGACAAATGGATTTTCAAGGGAATATGACAACTGGAGTGGTTTGACAGTAAATTCTTTTGCCCAAGCAGATGGTAACACACTGGTCAATGGTGCAAGACTTTCAAACAATGGAATTGATGCTGAAATGGAGGATTGTTCTAATTCTACCAAAGGTGCAAAGAGGACGTGGGAAGCCTCTTTGTCATCGTTAAAGTCAAAAAGAGTGAAAGGAAGCCACTTAGTTGATCGCGGATCAGATTCCAGCCGGGGTTTTGTTTCAGAGGCCGATAGGTCCAATTCCGGTTTTATGGGATGCTCATGGGGTGCCTTAAGAGGAAAAATTTCAGTGGACCTTCCTTGTGGTGATACTTTGATTGTTAGTGAAAATAATTCTGAAAAATTCACTGCGGATTATTTACATTCAGAAGCTTTTCTCAGCAATAAACCGCCATCAACTAAACAATACTTTAGAATCATGTTGATGAATATTGCTGATGAAGCCAAGAAAGCACACCTCACAAAGGTAATTGAAGACCTTGGTGGCACTGTTACCTCTGATGGAAGCATGACGACACATGTTATCACAGGCCAAGTGAGGAAAACTTTAAATTTCTGCACTGCCCTCTGTTCAGGGGCTTGGGTGGTCTCATCAGATTGGTTAAAAGAAAGCTTTCGCGAAGGACAATTTGTGGATGAATTACCTTACATACTAAATGATCAGGATTATCTATTGAAGTACAGATCTGATTTAAAAAGTGCAGTTCTCCGAGCAAAAGCCTGCCCCGGAGCTTTGTTCAAGGGGTATAATTTATGTATTGCAGCTCATGTTCAACCTCCTGCTAAAACACTCTCTGCAATTGTGAGGTCGGCTGGTGGCAATGTTATTGGTGAACTTCAGAAAGTTAATGAAGCATCCACAACCATTTTTGTGACGTGCGAAGAAGATATGGAAGAAGCAATGATAGCTGCAAAGAAAGGGATGAGGACTTTCAGTAGTGAGTGGTTTATGAACTGTGTCATGAGACAGGAACTTGACATGGAGGCCTCCCAATTTGCAGAGTCCTTATAG 1995 0.4055 MAPRTKPSSPIPIGNCEITVEAKNFTSKSDANSLYISLPRSGKIKVSVVKDVATNNINESDNFKTDDRVYIANDFVLVNPKDADGISKSYLQEVLQIYMTELPGMNYAANTGKKSNFLERCVNNGKYRTLLLKSGSVGNSGKVIAAITYQIVPADTEYAEIPLAAVSAIYQRKGLGQLLFLELRKRLQNVGIRSILCWGDKESEGFWLKQGFISIAEVDSKGRARRLPIKADIRKALCFPGGSTLMVCHLRMEFSTDAANSIKCLPSQLHQNSLKSADAENDQHKFTGQLHMDLNISNKSTCRTDNAENGHLDALVTNGFSREYDNWSGLTVNSFAQADGNTLVNGARLSNNGIDAEMEDCSNSTKGAKRTWEASLSSLKSKRVKGSHLVDRGSDSSRGFVSEADRSNSGFMGCSWGALRGKISVDLPCGDTLIVSENNSEKFTADYLHSEAFLSNKPPSTKQYFRIMLMNIADEAKKAHLTKVIEDLGGTVTSDGSMTTHVITGQVRKTLNFCTALCSGAWVVSSDWLKESFREGQFVDELPYILNDQDYLLKYRSDLKSAVLRAKACPGALFKGYNLCIAAHVQPPAKTLSAIVRSAGGNVIGELQKVNEASTTIFVTCEEDMEEAMIAAKKGMRTFSSEWFMNCVMRQELDMEASQFAESL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1351 664 Pfam Acetyltransferase (GNAT) family 139 212 IPR000182 GO:0016407
Sto8g1351 664 Gene3D BRCT domain 572 663 IPR036420 -
Sto8g1351 664 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 5 664 - -
Sto8g1351 664 SUPERFAMILY BRCT domain 466 548 IPR036420 -
Sto8g1351 664 CDD BRCT_PAXIP1_rpt6_like 573 654 - -
Sto8g1351 664 SMART BRCT_7 571 651 IPR001357 -
Sto8g1351 664 SMART BRCT_7 459 536 IPR001357 -
Sto8g1351 664 ProSiteProfiles BRCT domain profile. 569 653 IPR001357 -
Sto8g1351 664 CDD BRCT_MDC1_rpt1 465 539 - -
Sto8g1351 664 PANTHER N-ACETYLTRANSFERASE 5 664 - -
Sto8g1351 664 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 92 219 IPR016181 -
Sto8g1351 664 Gene3D BRCT domain 455 567 IPR036420 -
Sto8g1351 664 ProSiteProfiles BRCT domain profile. 467 546 IPR001357 -
Sto8g1351 664 SUPERFAMILY BRCT domain 573 653 IPR036420 -
Sto8g1351 664 CDD NAT_SF 139 198 - -
Sto8g1351 664 Gene3D - 72 228 - -
Sto8g1351 664 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 456 546 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1351 476 605 Core DNA Replication Machinery Family AT4G02110 24.460 1.71e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sto8g1351 RTT107_BRCT_5 1.4e-07 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1351 - - gmx:100806087 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1351 8 8620520 8626139 Sto8g1351 8 8620520 8626139 ECH