Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1346 atggACCCTATGAAGTTGAATGAACTTGCTTTAAAGTCATCAGTCATCTTAGCCTTTTGCATCGGCCACATCATTGGAAGAGTCATCATCGGTCAGATTAGGAAGCCAAAGTGGAAGTGCTGGTTTGGCTGGGTGAAAAGACTCGTCACTCCTGAGTCAAAGGCAAAAAAACCAAAGAAATGGGGATGGAGTGTTGGAAGGCTTAAGCTAAGACAGTGTCCCACACTTACAGCACCAGATAGAACACTAAGTGAAGCACAAGAAGAACAGAAAAAGCATGCTTTGACTTTGGCTATTGCAACAGCAGCAGCTGCAGAGGCTGCTGTTGCTGCTGCTCACGCTGCTGCCGAGGTTGTCCGGCTAACAGGTGATTCCCGTTCCTATTCTTATCTGTCTAAAGGAGACCGAAACTTGGCCGCAATTAAGATTCAAAGTGCATACCGTGGACATCTAGCTAGGAAAGCATTGAGAGCATTGAAGGGAGTTGTAAGACTGCAAGCTATTGTTCGTGGTCAAGCCGTGAGACGTGAACTGTTGAGCAGTCTGAAGCATTTGCCCTCCAATGCAACAGAGCAGGTAGAAATCCAGGAAGGAAACAGTCATGCTGCAACAGATGAAAGCCACAAAAATGAAAGGAGCAATCAGTTTCCAAAGGAGAAAAAGAAGCTGGAAGAGAGGGAAACTAAGACTGAATGCCACAGACAAAGTACTTGGGATTGCAGCTCGCACTCAAAAGAAGACATGGAAGCCATATGGTTAAGAAAGCAAGAGGCCTCTCTCAAAAGAGAACGCATGAAGAAGTATTCTTTCTCACACCGGGAGAGAAAAATTTCCCAAATGGTGGAAGAATGTGTGCCCAGTAAGGAATTGGGAAAAGAGAGCTGCCGGACTCTAGGACAATGGCTGCATGAAGAAACATGTAAAAGTAAAAGGAATGAATTGTATAGTTCAACACCAGTTGCACAGAAGcatgtgaagaaagaagactcaCAGGAAGGGTTAGATTCCCAAATTTTACTCCCCAGGAAATCATTTTCTCATGTAAAGAAAGGATCAGTTGGAGATGATAGTTCCATGCCAAATTCTCCAGTTTTTCCCACTTACATGGCTGTGACAGAATCCGCCAAGGCAAAGGCAAGGTCTATAAGTACGCCAAGGCAAAGAACAGAATTTCTGGAGTTATGTTCCAAACAGAGTGAGCCTTACAAGGAAGGCATATCTTTCTGGTCTTCTCATTTTGGTGAACCTACCAGCACTGATAGAAATAGTGGAGTTTATCAGTGGAGATGTCGGAGTGCAAATCACCATCACTATCATTAG 1320 0.4348 MDPMKLNELALKSSVILAFCIGHIIGRVIIGQIRKPKWKCWFGWVKRLVTPESKAKKPKKWGWSVGRLKLRQCPTLTAPDRTLSEAQEEQKKHALTLAIATAAAAEAAVAAAHAAAEVVRLTGDSRSYSYLSKGDRNLAAIKIQSAYRGHLARKALRALKGVVRLQAIVRGQAVRRELLSSLKHLPSNATEQVEIQEGNSHAATDESHKNERSNQFPKEKKKLEERETKTECHRQSTWDCSSHSKEDMEAIWLRKQEASLKRERMKKYSFSHRERKISQMVEECVPSKELGKESCRTLGQWLHEETCKSKRNELYSSTPVAQKHVKKEDSQEGLDSQILLPRKSFSHVKKGSVGDDSSMPNSPVFPTYMAVTESAKAKARSISTPRQRTEFLELCSKQSEPYKEGISFWSSHFGEPTSTDRNSGVYQWRCRSANHHHYH 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1346 439 PANTHER IQ-DOMAIN 12 39 423 - -
Sto8g1346 439 ProSiteProfiles IQ motif profile. 136 164 IPR000048 GO:0005515
Sto8g1346 439 MobiDBLite consensus disorder prediction 201 233 - -
Sto8g1346 439 Pfam IQ calmodulin-binding motif 139 157 IPR000048 GO:0005515
Sto8g1346 439 MobiDBLite consensus disorder prediction 189 233 - -
Sto8g1346 439 Pfam Protein of unknown function (DUF4005) 356 390 IPR025064 -
Sto8g1346 439 PANTHER IQ-DOMAIN 5-RELATED 39 423 - -
Sto8g1346 439 Gene3D - 135 186 - -
Sto8g1346 439 SMART iq_5 135 157 IPR000048 GO:0005515
Sto8g1346 439 SMART iq_5 158 179 IPR000048 GO:0005515
Sto8g1346 439 ProSiteProfiles IQ motif profile. 160 187 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1346 Sto-Chr8 8575993 8578223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1346 39 420 IQD Protein Family AT5G03960 43.622 7.84e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1346 - - gmx:100800767 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1346 8 8575993 8578223 Sto8g1346 8 8575993 8578223 ECH