Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1335 ATGGAGAGTCTGTTGAAGGATTTCGTAATAGAGCACAAGAATCGATCTATTGAAGCTTCTGCTAGGTGGAGGTCCGCCGTCACGTTAGTCAAGAACCGCCGGAGACGGTTCCGAATGGTCGCAGATCTCGCAAAACGTTACGAAGCcgagaagaagagaaaggaaattCAGGATAAAGTTCGGGTTGCACTCTTTGTTCAAAAGGCAGCATTGCAGTTTCTTGAGGCTGGTGGTCGAGCTGAACGCAAGCTACCAGAAGAGGTGAAAAAAGCTGGTTTTGGTATTGATCCAGATGAGGTAGCATCCATTGTTCGTGGCCACGATCATGACACGCTGAAATTACTTGGTGGAGTTAAAGAAATTGCAGGGGAACTCTCAGTTTCACTAGAAGAAGGCGTCAAAGatgagagtataaatacaaggCAACAGATTTATGGGTTCAACCGTTACACAGAGAAACCTCCCAGAACCTTTCTGATGTTTGTATGGGAAGCACTTCAGGATTTGACCCTAATCATTCTCATGGTTTGTGCCATAGTTTCTATAGGTGTAGGGATTGCCACTGAAGGGTGGCCCAAGGGTATGTACGATGGTCTGGGAATCATATTCAGTGTGTTCTTGGTAGTTATTGTTACTGCTATAAGTGACTACAAGCAATCCTTGCAGTTCAGGGATTTagataaagagaagaaaaagatatTTGTTCAGGTCAACAGAAATGGGAAAAGACAGAAGATCTCAATTTATGATGTGGTAGTGGGAGATATTGTATATTTGTCCACTGGGGATCTAGTTCCGGCTGATGGTGTTTACATATCTGGATACAACTTGTTGATCGATGAATCAAGTTTGACAGGTGAGAGCGAACCAGTAAACGTGCATGAGAAGAAACCTTTTCTTCTTGCAGGAACCACAGTGCAAGATGGTCAGGGGAAGATGTTGGTGACAACTGTTGGCATGAGGACAGAATGGGGAAAGTTGATGGAAACATTGAGTGAGGGAGGAGAGGATGAGACACCCTTGCAGGTGAAATTGAATGGAGTTGCTACAATTATTGGTAAGATTGGCTTGACTTTCGCCGTGTTGACATTTTTGGTGTTGACAATTAGGTTCGTGTTTGAAAAGGCAGTTCTTGATGATCTTACTCACTGGTCTTCAAATGATGCAGTGAAGTTGCTAAACTACTTTGCTATTTCTGTAACCATAATAGTTGTTGCAGTTCCTGAAGGATTACCTTTGGCCGTGACACTCAGCCTTGCATTTGCAATGAAAAAACTTATGAATGATAAGGCACTTGTGAGGCATCTTTCTGCTTGTGAAACAATGGGTTCAGCCAGTTGCATTTGCACAGACAAGACAGGGACATTAACCACTAACCATATGGTGGTTGATAAAATTTGGCTATGCGGAAAAGCCATGGAAATGAAAGGTACTAATGAGATTCCTGAAGGAGTTTTGAGTATCCTTTTGCAGGCTATATTTCAAAACACTTCTTCTGAAGTAGTCAAAAACAAAGATGGAAAGAACAAGATATTAGGAACACCAACAGAATCAGCATTACTTGAATTTGGCTTGCTTTTGGGCGGTGATTTTGATGCTCAGCGCAAAGAGTCTAAAATACTTGAGCTCGAGCCTTTTAATTCAGTCCGGAAGAAGATGTCTGTCCTTGTTGGTCTTCCTGATGGAAAGAAACGAGCTTTCTGCAAAGGTGCATcagaaataatattaaaaatgtgtGACAAAATTATTGATGCCAATGGAGAAACGGTTGATCTTCCTGAAGAACTTGCAAAGAATGTCTCTGATGTTATAAACAGTTTTGCCTCTGAAGCTTTAAGAACTCTCTGTTTGGCAGTCAAAGACATAAATGAAAACGAAGGGGAAACTGGTATTCCTGAAAATGGCTATACACTGATAGCCATTGTAGGAATCAAGGATCCTGTTCGCCCTGGGGTTAAGGAAGCTGTTCAAACTTGTTTGGCTGCTGGAATAACCGTTCGTATGGTCACTGGTGATAATATAAATACAGCTAGAGCTATAGCTAAAGAATGTGGTATATTCACGGAGAGAGGTGTAGCCATAGAAGGACCAGAATTTCGTAACTTGTCTCCTGAGCAAATGAAGGACATCGTACCAAGAATTCAAGTAATGGCACGATCCTTGCCGCTTGACAAACACACCTTGGTGACCCATTTAAAGAAAACATTTGGTGAAGTTGTGGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCTCTGCATGAGTCAGATATTGGACTTGCCATGGGCATTGCTGGAACCGAGGTTGCCAAAGAGAATGCCGACGTCATTATAATGGATGATAACTTCACGACTATTGTGAATGTGGCCAAGTGGGGACGTGCAGTATACATAAACATTCAAAAATTTGTTCAATTTCAGTTAACAGTCAATATTGTTGCTCTGGTGATCAACTTTGTTTCTGCATGCATCACAGGATCTGCTCCACTAACAGCTGTACAATTACTATGGGTAAACTTGATTATGGATACTTTAGGTGCATTAGCCCTGGCCACCGAGCCTCCTAATGATGGACTTATGAAAAGGCAGCCAGTTGGGAGGGGAGCAAGTTTTATCACTAAAACCATGTGGAGGAATATCATTGGTCAAAGTATTTATCAATTAATTGTGCTTGCCGTTCTTAATTTTGATGGGAAGAGGCTGCTGGGAATCAGTGGTTCTGATGCAACTATGGTGCTTAATACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTCTTCAATGAGATAAACAGCCGAGATATGGAAAAGATAAACGTATTCAGAGGCATTTTTGACAGCTGGGTATTCTTAGGTATAATTTTCTCCACTGTAGCATTTCAAGTCATCATAGTTGAGTTCTTGGGGACTTTTGCCAGCACGGTGCCTTTGAACTGGCAATTCTGGGTACTCAGTGTCCTAATTGGAGCAGTTAGCATGCCAATATCTGCTATTCTCAAGTGCATCCCAGTTGAAAGAGATATAATTAAGCATAAGCACCACGATGGTTACGAGGAATTGCCTTCTGGTCCCGAGCTGGCATAA 3084 0.4112 MESLLKDFVIEHKNRSIEASARWRSAVTLVKNRRRRFRMVADLAKRYEAEKKRKEIQDKVRVALFVQKAALQFLEAGGRAERKLPEEVKKAGFGIDPDEVASIVRGHDHDTLKLLGGVKEIAGELSVSLEEGVKDESINTRQQIYGFNRYTEKPPRTFLMFVWEALQDLTLIILMVCAIVSIGVGIATEGWPKGMYDGLGIIFSVFLVVIVTAISDYKQSLQFRDLDKEKKKIFVQVNRNGKRQKISIYDVVVGDIVYLSTGDLVPADGVYISGYNLLIDESSLTGESEPVNVHEKKPFLLAGTTVQDGQGKMLVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATIIGKIGLTFAVLTFLVLTIRFVFEKAVLDDLTHWSSNDAVKLLNYFAISVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVDKIWLCGKAMEMKGTNEIPEGVLSILLQAIFQNTSSEVVKNKDGKNKILGTPTESALLEFGLLLGGDFDAQRKESKILELEPFNSVRKKMSVLVGLPDGKKRAFCKGASEIILKMCDKIIDANGETVDLPEELAKNVSDVINSFASEALRTLCLAVKDINENEGETGIPENGYTLIAIVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTARAIAKECGIFTERGVAIEGPEFRNLSPEQMKDIVPRIQVMARSLPLDKHTLVTHLKKTFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMKRQPVGRGASFITKTMWRNIIGQSIYQLIVLAVLNFDGKRLLGISGSDATMVLNTLIFNSFVFCQVFNEINSRDMEKINVFRGIFDSWVFLGIIFSTVAFQVIIVEFLGTFASTVPLNWQFWVLSVLIGAVSMPISAILKCIPVERDIIKHKHHDGYEELPSGPELA 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1335 1027 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1004 IPR023298 -
Sto8g1335 1027 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 647 IPR023299 GO:0000166
Sto8g1335 1027 Gene3D - 15 75 - -
Sto8g1335 1027 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Sto8g1335 1027 Gene3D - 459 647 IPR023299 GO:0000166
Sto8g1335 1027 Gene3D - 164 1002 - -
Sto8g1335 1027 Gene3D - 446 788 IPR023214 -
Sto8g1335 1027 CDD P-type_ATPase_Ca_PMCA-like 138 876 - -
Sto8g1335 1027 SUPERFAMILY HAD-like 448 848 IPR036412 -
Sto8g1335 1027 SFLD p-type atpase 431 795 IPR044492 -
Sto8g1335 1027 SFLD C1.7: P-type atpase like 431 795 - -
Sto8g1335 1027 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Sto8g1335 1027 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Sto8g1335 1027 PRINTS P-type cation-transporting ATPase superfamily signature 640 651 - -
Sto8g1335 1027 PRINTS P-type cation-transporting ATPase superfamily signature 662 672 - -
Sto8g1335 1027 PRINTS P-type cation-transporting ATPase superfamily signature 743 762 - -
Sto8g1335 1027 PRINTS P-type cation-transporting ATPase superfamily signature 767 779 - -
Sto8g1335 1027 SMART Cation_ATPase_N_a_2 117 186 IPR004014 -
Sto8g1335 1027 PANTHER CATION TRANSPORTING ATPASE 7 1011 - -
Sto8g1335 1027 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 538 689 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto8g1335 1027 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 708 831 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto8g1335 1027 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 201 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto8g1335 1027 Pfam Cation transporter/ATPase, N-terminus 116 181 IPR004014 -
Sto8g1335 1027 SUPERFAMILY Calcium ATPase, transduction domain A 234 330 IPR008250 -
Sto8g1335 1027 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 97 1005 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sto8g1335 1027 Pfam Cation transport ATPase (P-type) 498 582 - -
Sto8g1335 1027 Pfam Cation transporting ATPase, C-terminus 828 1001 IPR006068 -
Sto8g1335 1027 PANTHER CALCIUM-TRANSPORTING ATPASE 7 1011 - -
Sto8g1335 1027 Gene3D - 132 332 - -
Sto8g1335 1027 Pfam E1-E2 ATPase 235 427 - -
Sto8g1335 1027 PRINTS H+-transporting ATPase (proton pump) signature 600 618 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto8g1335 1027 PRINTS H+-transporting ATPase (proton pump) signature 743 759 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto8g1335 1027 PRINTS H+-transporting ATPase (proton pump) signature 775 800 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto8g1335 1027 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1335 Sto-Chr8 8502892 8514904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1335 56 1024 Primary Pumps ATPases AT3G57330 73.457 0.0 1484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1335 K01537 - gmx:100783489 1645.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1335 8 8502892 8514904 Sto13g2836 13 33702929 33712426 CCT
Sto8g1335 8 8502892 8514904 Sto8g1335 8 8502892 8514904 ECH