Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1322 ATGAGGAAGAGCATTGCATGGGAAGATTTAACAGTGGAAGTGCCTTGTTTGGATGGTCTCaataagaataagaagaagCTGCTTCTTCATTCTCTCACTGCTTTTGCTTATTCTCATAGGATTATGGCTCTCTTGGGTCCTTCTGGCTCTGGCAAAACCACTCTTCTCAACTCTCTTGCTGGAACACTTCCTGCAAATGCTACACTCACTGGAAACATTCTCATCAATGGCACCAACAGAAACTTATATCGCGGACAGATGTCTTACGTCGCTCAACAAGAGTATTTCTTGGGAACTTTGACTGTGAGAGAAACCCTAACTTACTCTGCCAAAATGAGGCTTGTTTCGAGAATGACACAACAAGAGATAAGCAAGGTGGTCCAAGAAACAATCATGCAGATGGGGCTTGAAGAGTGTGCTGATAACCAGATCGGGAATTGGCATTTGCGAGGGATCAGTAATGGTGAAAAGAAGCGATTAAGCATTGGTCTTGAGATTTTGACACAACCTGATTTCTTATTCCTCGATGAACCCACCAGTGGGCTTGATAGCGCCTCAGCTTTCTACGTTATCCGAGCCCTAAGCGATATAGCTTGTGGTGGAAAGATAGTTGTATGTTCGATTCACCAACCGAGTAGCGAAATTTTTCATCTGTTTGATGATTTGCTCTTGCTCTCAGGTGGAGAAACTGTGTATTTTGGCGAAGCAAAGATGGCTTTAGAGTTTTTTGCTAATGCAGGGTTTCCTTGTCCAACTAGAAGAAACCCTTCTGATCATTTTCTTCTATGCATTAATGTGGACTTTGAATTGATACCAACATCATCAAATTCTGCCATGGTCATGAAAACATCAGAGATTAGAGAGACCCTCATTGAGAGTTACAAAAGTACAGACAACAACTCAATATTGGCTAGAGGAAAGTGTATATCATTCATCTATGGCTTCATGATTTGTTTGTCTTGTGGAGGATTGCCATTTTTCATTGAAGAACTGAAGGTGTTCTATGGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGTATTTGTACTATCAAACATCCTATCATCATTCCCTTTCCTTGTTCTTATATCACTCTTTTCGGGAACAATCATATACTACATGGTGCGGTTTCATCCGGGTTTATCCCATTGGGCATTTTTCTGCATCAACTTGTTCTGCTGCTTATCGGTTGTTGAGAGCTGCATCATGGTTGTGGCCTCAGTAGTTCCCAATGTCCTCATGGGTATTGGAACAGGAACTGGTGTAATAGTAAGCAAATCATTCTCTCAGATCTTTATGATGATGTCTTCTCCAATCTTCAGACCACAAACTGACATTCCCAAGTTTTTTTGGCGTTACCCTATGTCCTACCTCAGTTTTGCTACTTGGGCAGTACAGGGACAGTACAAGAATGATATGGTGGGGCTTGAATTTGATCCTCTGCTACCTGGTGATTCAAGAGTTAAGGGAGAACATATCCTAAAATTGGTATTTGGAGTTCCATTAGATCATGGCAAATGGTGGGACTTAACAGCACTCATCACCTTATTGTTAATTCACCGAATGCTCCTTTTCTTTGTACTTAGGTTCAAGAATAAATCCAATTCATCTTTGCTTTGGTTTTATGCCAAGGTAAGTCTACACCACTTTGCTGCAAGATTTTCACCATCTTACAACAAACCATCTATCTCTTCCAAGAATCAGCATGCTCcccctccattatcttctcaaGAGGGTCTCATGTCTCCCAACTATACTATATGA 1764 0.4053 MRKSIAWEDLTVEVPCLDGLNKNKKKLLLHSLTAFAYSHRIMALLGPSGSGKTTLLNSLAGTLPANATLTGNILINGTNRNLYRGQMSYVAQQEYFLGTLTVRETLTYSAKMRLVSRMTQQEISKVVQETIMQMGLEECADNQIGNWHLRGISNGEKKRLSIGLEILTQPDFLFLDEPTSGLDSASAFYVIRALSDIACGGKIVVCSIHQPSSEIFHLFDDLLLLSGGETVYFGEAKMALEFFANAGFPCPTRRNPSDHFLLCINVDFELIPTSSNSAMVMKTSEIRETLIESYKSTDNNSILARGKCISFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAVFVLSNILSSFPFLVLISLFSGTIIYYMVRFHPGLSHWAFFCINLFCCLSVVESCIMVVASVVPNVLMGIGTGTGVIVSKSFSQIFMMMSSPIFRPQTDIPKFFWRYPMSYLSFATWAVQGQYKNDMVGLEFDPLLPGDSRVKGEHILKLVFGVPLDHGKWWDLTALITLLLIHRMLLFFVLRFKNKSNSSLLWFYAKVSLHHFAARFSPSYNKPSISSKNQHAPPPLSSQEGLMSPNYTI 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1322 587 Gene3D - 1 246 IPR027417 -
Sto8g1322 587 SMART AAA_5 38 229 IPR003593 -
Sto8g1322 587 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 5 252 IPR003439 GO:0005524
Sto8g1322 587 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 5 297 - -
Sto8g1322 587 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 297 552 - -
Sto8g1322 587 MobiDBLite consensus disorder prediction 562 587 - -
Sto8g1322 587 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 297 552 - -
Sto8g1322 587 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 297 - -
Sto8g1322 587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 243 IPR027417 -
Sto8g1322 587 Pfam ABC transporter 38 180 IPR003439 GO:0005524
Sto8g1322 587 Pfam ABC-2 type transporter 299 467 IPR013525 GO:0016020|GO:0140359
Sto8g1322 587 Pfam ABC-2 type transporter 209 264 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1322 Sto-Chr8 8391453 8401191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1322 28 221 Calmodulin-binding Proteins AT2G36910 25.854 6.41e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1322 K05681 - peu:105131875 655.595